Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 AC127502.1-201ENST00000399971 1502 ntBASIC23.05■■□□□ 1.28
C12orf49Q9H741 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.05■■□□□ 1.28
C12orf49Q9H741 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
C12orf49Q9H741 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
C12orf49Q9H741 ST7-AS1-201ENST00000456775 1889 ntBASIC23.05■■□□□ 1.28
C12orf49Q9H741 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.04■■□□□ 1.28
C12orf49Q9H741 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.03■■□□□ 1.28
C12orf49Q9H741 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
C12orf49Q9H741 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.03■■□□□ 1.28
C12orf49Q9H741 LINC01971-201ENST00000617888 1048 ntBASIC23.03■■□□□ 1.28
C12orf49Q9H741 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
C12orf49Q9H741 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.02■■□□□ 1.28
C12orf49Q9H741 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
C12orf49Q9H741 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.01■■□□□ 1.27
C12orf49Q9H741 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.01■■□□□ 1.27
C12orf49Q9H741 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.01■■□□□ 1.27
C12orf49Q9H741 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.01■■□□□ 1.27
C12orf49Q9H741 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
C12orf49Q9H741 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
C12orf49Q9H741 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23■■□□□ 1.27
C12orf49Q9H741 HLA-V-202ENST00000446817 847 ntBASIC23■■□□□ 1.27
C12orf49Q9H741 DUX4L11-201ENST00000611504 1267 ntBASIC22.99■■□□□ 1.27
C12orf49Q9H741 DUX4L12-201ENST00000614593 1267 ntBASIC22.99■■□□□ 1.27
C12orf49Q9H741 DUX4L14-201ENST00000621227 1267 ntBASIC22.99■■□□□ 1.27
C12orf49Q9H741 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
C12orf49Q9H741 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.98■■□□□ 1.27
C12orf49Q9H741 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.97■■□□□ 1.27
C12orf49Q9H741 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.97■■□□□ 1.27
C12orf49Q9H741 LINC00273-201ENST00000539813 1452 ntBASIC22.97■■□□□ 1.27
C12orf49Q9H741 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
C12orf49Q9H741 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.97■■□□□ 1.27
C12orf49Q9H741 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.96■■□□□ 1.27
C12orf49Q9H741 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.96■■□□□ 1.27
C12orf49Q9H741 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
C12orf49Q9H741 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.95■■□□□ 1.26
C12orf49Q9H741 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
C12orf49Q9H741 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
C12orf49Q9H741 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.93■■□□□ 1.26
C12orf49Q9H741 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
C12orf49Q9H741 ABCB10P1-201ENST00000614297 2181 ntBASIC22.93■■□□□ 1.26
C12orf49Q9H741 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
C12orf49Q9H741 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
C12orf49Q9H741 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.92■■□□□ 1.26
C12orf49Q9H741 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.92■■□□□ 1.26
C12orf49Q9H741 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
C12orf49Q9H741 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
C12orf49Q9H741 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
C12orf49Q9H741 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.92■■□□□ 1.26
C12orf49Q9H741 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.92■■□□□ 1.26
C12orf49Q9H741 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
C12orf49Q9H741 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
C12orf49Q9H741 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.91■■□□□ 1.26
C12orf49Q9H741 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.91■■□□□ 1.26
C12orf49Q9H741 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
C12orf49Q9H741 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
C12orf49Q9H741 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
C12orf49Q9H741 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
C12orf49Q9H741 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
C12orf49Q9H741 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.9■■□□□ 1.26
C12orf49Q9H741 AC016575.1-201ENST00000607026 382 ntBASIC22.9■■□□□ 1.26
C12orf49Q9H741 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
C12orf49Q9H741 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.89■■□□□ 1.25
C12orf49Q9H741 MIR3648-2-201ENST00000581792 180 ntBASIC22.89■■□□□ 1.25
C12orf49Q9H741 MIR3648-1-201ENST00000615959 180 ntBASIC22.89■■□□□ 1.25
C12orf49Q9H741 CR559946.2-201ENST00000623684 991 ntBASIC22.89■■□□□ 1.25
C12orf49Q9H741 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
C12orf49Q9H741 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
C12orf49Q9H741 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
C12orf49Q9H741 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
C12orf49Q9H741 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
C12orf49Q9H741 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.88■■□□□ 1.25
C12orf49Q9H741 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.88■■□□□ 1.25
C12orf49Q9H741 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
C12orf49Q9H741 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
C12orf49Q9H741 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
C12orf49Q9H741 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
C12orf49Q9H741 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.87■■□□□ 1.25
C12orf49Q9H741 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
C12orf49Q9H741 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
C12orf49Q9H741 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
C12orf49Q9H741 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
C12orf49Q9H741 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L13-201ENST00000554103 1267 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L15-201ENST00000611059 1267 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L23-201ENST00000615195 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L24-201ENST00000617576 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L22-201ENST00000618238 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L20-201ENST00000619712 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L21-201ENST00000622058 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L10-201ENST00000622460 1267 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 DUX4L25-201ENST00000624915 1269 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 WHAMMP2-203ENST00000563942 1603 ntBASIC22.86■■□□□ 1.25
C12orf49Q9H741 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
C12orf49Q9H741 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
C12orf49Q9H741 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
C12orf49Q9H741 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
C12orf49Q9H741 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
C12orf49Q9H741 AC135983.2-203ENST00000454486 1613 ntBASIC22.84■■□□□ 1.25
C12orf49Q9H741 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.84■■□□□ 1.25
C12orf49Q9H741 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms