Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCL19Q99731 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.27■■□□□ 1.16
CCL19Q99731 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCL19Q99731 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCL19Q99731 AL161658.1-201ENST00000623641 1967 ntBASIC22.26■■□□□ 1.15
CCL19Q99731 LINC00273-201ENST00000539813 1452 ntBASIC22.26■■□□□ 1.15
CCL19Q99731 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CCL19Q99731 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.25■■□□□ 1.15
CCL19Q99731 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CCL19Q99731 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.25■■□□□ 1.15
CCL19Q99731 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCL19Q99731 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCL19Q99731 GPX1-201ENST00000419349 1106 ntBASIC22.24■■□□□ 1.15
CCL19Q99731 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCL19Q99731 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCL19Q99731 ABHD17AP5-201ENST00000580133 923 ntBASIC22.23■■□□□ 1.15
CCL19Q99731 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CCL19Q99731 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCL19Q99731 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.22■■□□□ 1.15
CCL19Q99731 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCL19Q99731 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.21■■□□□ 1.15
CCL19Q99731 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCL19Q99731 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCL19Q99731 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCL19Q99731 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.2■■□□□ 1.14
CCL19Q99731 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
CCL19Q99731 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCL19Q99731 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCL19Q99731 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCL19Q99731 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.19■■□□□ 1.14
CCL19Q99731 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCL19Q99731 AC010864.1-201ENST00000609407 1511 ntBASIC22.17■■□□□ 1.14
CCL19Q99731 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCL19Q99731 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.17■■□□□ 1.14
CCL19Q99731 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CCL19Q99731 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCL19Q99731 RNF126P1-201ENST00000567452 1320 ntBASIC22.16■■□□□ 1.14
CCL19Q99731 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCL19Q99731 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCL19Q99731 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CCL19Q99731 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCL19Q99731 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.15■■□□□ 1.14
CCL19Q99731 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCL19Q99731 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CCL19Q99731 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCL19Q99731 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCL19Q99731 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCL19Q99731 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCL19Q99731 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.14■■□□□ 1.13
CCL19Q99731 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCL19Q99731 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCL19Q99731 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCL19Q99731 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCL19Q99731 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CCL19Q99731 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CCL19Q99731 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.12■■□□□ 1.13
CCL19Q99731 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCL19Q99731 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CCL19Q99731 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCL19Q99731 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCL19Q99731 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CCL19Q99731 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CCL19Q99731 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCL19Q99731 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCL19Q99731 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CCL19Q99731 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.08■■□□□ 1.13
CCL19Q99731 AC022413.1-201ENST00000624602 984 ntBASIC22.08■■□□□ 1.13
CCL19Q99731 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.08■■□□□ 1.12
CCL19Q99731 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CCL19Q99731 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL19Q99731 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCL19Q99731 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.07■■□□□ 1.12
CCL19Q99731 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCL19Q99731 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CCL19Q99731 AC008813.1-201ENST00000536597 885 ntBASIC22.06■■□□□ 1.12
CCL19Q99731 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.06■■□□□ 1.12
CCL19Q99731 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
CCL19Q99731 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCL19Q99731 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCL19Q99731 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCL19Q99731 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.04■■□□□ 1.12
CCL19Q99731 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.04■■□□□ 1.12
CCL19Q99731 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCL19Q99731 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.03■■□□□ 1.12
CCL19Q99731 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCL19Q99731 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCL19Q99731 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCL19Q99731 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL19Q99731 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22■■□□□ 1.11
CCL19Q99731 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCL19Q99731 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCL19Q99731 NTF6A-201ENST00000591175 560 ntBASIC21.99■■□□□ 1.11
CCL19Q99731 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CCL19Q99731 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCL19Q99731 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms