Protein–RNA interactions for Protein: Q96S99

PLEKHF1, Pleckstrin homology domain-containing family F member 1, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHF1Q96S99 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PLEKHF1Q96S99 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.47■■■■□ 3.11
PLEKHF1Q96S99 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
PLEKHF1Q96S99 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PLEKHF1Q96S99 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
PLEKHF1Q96S99 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
PLEKHF1Q96S99 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
PLEKHF1Q96S99 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
PLEKHF1Q96S99 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
PLEKHF1Q96S99 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
PLEKHF1Q96S99 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.42■■■■□ 3.1
PLEKHF1Q96S99 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.41■■■■□ 3.1
PLEKHF1Q96S99 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC34.41■■■■□ 3.1
PLEKHF1Q96S99 LINC00273-201ENST00000539813 1452 ntBASIC34.4■■■■□ 3.1
PLEKHF1Q96S99 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC34.4■■■■□ 3.1
PLEKHF1Q96S99 MIR7108-201ENST00000614319 87 ntBASIC34.4■■■■□ 3.1
PLEKHF1Q96S99 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.39■■■■□ 3.1
PLEKHF1Q96S99 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.38■■■■□ 3.09
PLEKHF1Q96S99 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
PLEKHF1Q96S99 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC34.37■■■■□ 3.09
PLEKHF1Q96S99 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
PLEKHF1Q96S99 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
PLEKHF1Q96S99 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
PLEKHF1Q96S99 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
PLEKHF1Q96S99 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
PLEKHF1Q96S99 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.35■■■■□ 3.09
PLEKHF1Q96S99 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
PLEKHF1Q96S99 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
PLEKHF1Q96S99 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
PLEKHF1Q96S99 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
PLEKHF1Q96S99 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHF1Q96S99 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHF1Q96S99 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHF1Q96S99 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.32■■■■□ 3.09
PLEKHF1Q96S99 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.32■■■■□ 3.08
PLEKHF1Q96S99 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHF1Q96S99 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
PLEKHF1Q96S99 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHF1Q96S99 LINC01971-201ENST00000617888 1048 ntBASIC34.31■■■■□ 3.08
PLEKHF1Q96S99 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC34.31■■■■□ 3.08
PLEKHF1Q96S99 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHF1Q96S99 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.3■■■■□ 3.08
PLEKHF1Q96S99 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
PLEKHF1Q96S99 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
PLEKHF1Q96S99 AC135983.2-203ENST00000454486 1613 ntBASIC34.29■■■■□ 3.08
PLEKHF1Q96S99 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHF1Q96S99 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
PLEKHF1Q96S99 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHF1Q96S99 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHF1Q96S99 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.27■■■■□ 3.08
PLEKHF1Q96S99 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PLEKHF1Q96S99 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
PLEKHF1Q96S99 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.27■■■■□ 3.08
PLEKHF1Q96S99 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
PLEKHF1Q96S99 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.08
PLEKHF1Q96S99 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
PLEKHF1Q96S99 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
PLEKHF1Q96S99 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
PLEKHF1Q96S99 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHF1Q96S99 WHAMMP2-203ENST00000563942 1603 ntBASIC34.24■■■■□ 3.07
PLEKHF1Q96S99 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.23■■■■□ 3.07
PLEKHF1Q96S99 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.23■■■■□ 3.07
PLEKHF1Q96S99 DUX4L11-201ENST00000611504 1267 ntBASIC34.23■■■■□ 3.07
PLEKHF1Q96S99 DUX4L12-201ENST00000614593 1267 ntBASIC34.23■■■■□ 3.07
PLEKHF1Q96S99 DUX4L14-201ENST00000621227 1267 ntBASIC34.23■■■■□ 3.07
PLEKHF1Q96S99 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHF1Q96S99 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHF1Q96S99 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
PLEKHF1Q96S99 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
PLEKHF1Q96S99 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.2■■■■□ 3.07
PLEKHF1Q96S99 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
PLEKHF1Q96S99 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.19■■■■□ 3.06
PLEKHF1Q96S99 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
PLEKHF1Q96S99 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.18■■■■□ 3.06
PLEKHF1Q96S99 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PLEKHF1Q96S99 AL139393.2-201ENST00000608721 2025 ntBASIC34.17■■■■□ 3.06
PLEKHF1Q96S99 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC34.16■■■■□ 3.06
PLEKHF1Q96S99 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHF1Q96S99 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHF1Q96S99 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC34.15■■■■□ 3.06
PLEKHF1Q96S99 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.15■■■■□ 3.06
PLEKHF1Q96S99 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
PLEKHF1Q96S99 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PLEKHF1Q96S99 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC34.14■■■■□ 3.06
PLEKHF1Q96S99 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
PLEKHF1Q96S99 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.13■■■■□ 3.05
PLEKHF1Q96S99 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.13■■■■□ 3.05
PLEKHF1Q96S99 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
PLEKHF1Q96S99 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.11■■■■□ 3.05
PLEKHF1Q96S99 CR559946.2-201ENST00000623684 991 ntBASIC34.11■■■■□ 3.05
PLEKHF1Q96S99 DUX4L13-201ENST00000554103 1267 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L15-201ENST00000611059 1267 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L23-201ENST00000615195 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L24-201ENST00000617576 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L22-201ENST00000618238 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L20-201ENST00000619712 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L21-201ENST00000622058 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L10-201ENST00000622460 1267 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 DUX4L25-201ENST00000624915 1269 ntBASIC34.1■■■■□ 3.05
PLEKHF1Q96S99 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.09■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms