Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DUX3Q96PT4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX3Q96PT4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX3Q96PT4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.09■□□□□ 0.81
DUX3Q96PT4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
DUX3Q96PT4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.09■□□□□ 0.81
DUX3Q96PT4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX3Q96PT4 AL135925.1-201ENST00000605920 1701 ntBASIC20.08■□□□□ 0.81
DUX3Q96PT4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.08■□□□□ 0.81
DUX3Q96PT4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.08■□□□□ 0.81
DUX3Q96PT4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DUX3Q96PT4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
DUX3Q96PT4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX3Q96PT4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
DUX3Q96PT4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX3Q96PT4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.07■□□□□ 0.8
DUX3Q96PT4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX3Q96PT4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX3Q96PT4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX3Q96PT4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX3Q96PT4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX3Q96PT4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX3Q96PT4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DUX3Q96PT4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
DUX3Q96PT4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.05■□□□□ 0.8
DUX3Q96PT4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.05■□□□□ 0.8
DUX3Q96PT4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX3Q96PT4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX3Q96PT4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DUX3Q96PT4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 MIR639-201ENST00000384974 98 ntBASIC20.04■□□□□ 0.8
DUX3Q96PT4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX3Q96PT4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DUX3Q96PT4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.03■□□□□ 0.8
DUX3Q96PT4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.03■□□□□ 0.8
DUX3Q96PT4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.03■□□□□ 0.8
DUX3Q96PT4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX3Q96PT4 AC127502.1-201ENST00000399971 1502 ntBASIC20.03■□□□□ 0.8
DUX3Q96PT4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.03■□□□□ 0.8
DUX3Q96PT4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUX3Q96PT4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DUX3Q96PT4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DUX3Q96PT4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.02■□□□□ 0.8
DUX3Q96PT4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
DUX3Q96PT4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DUX3Q96PT4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.02■□□□□ 0.79
DUX3Q96PT4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.01■□□□□ 0.79
DUX3Q96PT4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.01■□□□□ 0.79
DUX3Q96PT4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DUX3Q96PT4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUX3Q96PT4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L13-201ENST00000554103 1267 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L15-201ENST00000611059 1267 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L23-201ENST00000615195 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L24-201ENST00000617576 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L22-201ENST00000618238 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L20-201ENST00000619712 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L21-201ENST00000622058 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L10-201ENST00000622460 1267 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 DUX4L25-201ENST00000624915 1269 ntBASIC20■□□□□ 0.79
DUX3Q96PT4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DUX3Q96PT4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.99■□□□□ 0.79
DUX3Q96PT4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DUX3Q96PT4 LINC00273-201ENST00000539813 1452 ntBASIC19.99■□□□□ 0.79
DUX3Q96PT4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DUX3Q96PT4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DUX3Q96PT4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.98■□□□□ 0.79
DUX3Q96PT4 MIR4449-201ENST00000578365 66 ntBASIC19.98■□□□□ 0.79
DUX3Q96PT4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DUX3Q96PT4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DUX3Q96PT4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.97■□□□□ 0.79
DUX3Q96PT4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.97■□□□□ 0.79
DUX3Q96PT4 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.96■□□□□ 0.79
DUX3Q96PT4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
DUX3Q96PT4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.96■□□□□ 0.79
DUX3Q96PT4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DUX3Q96PT4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.95■□□□□ 0.78
DUX3Q96PT4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DUX3Q96PT4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.95■□□□□ 0.78
DUX3Q96PT4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
DUX3Q96PT4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DUX3Q96PT4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.94■□□□□ 0.78
DUX3Q96PT4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DUX3Q96PT4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.94■□□□□ 0.78
DUX3Q96PT4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.93■□□□□ 0.78
DUX3Q96PT4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.93■□□□□ 0.78
DUX3Q96PT4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.93■□□□□ 0.78
DUX3Q96PT4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX3Q96PT4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DUX3Q96PT4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DUX3Q96PT4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DUX3Q96PT4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX3Q96PT4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DUX3Q96PT4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DUX3Q96PT4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DUX3Q96PT4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms