Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCD1Q96GM5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCD1Q96GM5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.51■■□□□ 1.99
SMARCD1Q96GM5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.5■■□□□ 1.99
SMARCD1Q96GM5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.5■■□□□ 1.99
SMARCD1Q96GM5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
SMARCD1Q96GM5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.49■■□□□ 1.99
SMARCD1Q96GM5 LINC01971-201ENST00000617888 1048 ntBASIC27.48■■□□□ 1.99
SMARCD1Q96GM5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.48■■□□□ 1.99
SMARCD1Q96GM5 LINC00273-201ENST00000539813 1452 ntBASIC27.47■■□□□ 1.99
SMARCD1Q96GM5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.47■■□□□ 1.99
SMARCD1Q96GM5 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCD1Q96GM5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCD1Q96GM5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMARCD1Q96GM5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.45■■□□□ 1.98
SMARCD1Q96GM5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCD1Q96GM5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCD1Q96GM5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCD1Q96GM5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCD1Q96GM5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCD1Q96GM5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCD1Q96GM5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
SMARCD1Q96GM5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
SMARCD1Q96GM5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.41■■□□□ 1.98
SMARCD1Q96GM5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.4■■□□□ 1.98
SMARCD1Q96GM5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.39■■□□□ 1.98
SMARCD1Q96GM5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.39■■□□□ 1.98
SMARCD1Q96GM5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.39■■□□□ 1.98
SMARCD1Q96GM5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMARCD1Q96GM5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SMARCD1Q96GM5 DUX4L11-201ENST00000611504 1267 ntBASIC27.38■■□□□ 1.97
SMARCD1Q96GM5 DUX4L12-201ENST00000614593 1267 ntBASIC27.38■■□□□ 1.97
SMARCD1Q96GM5 DUX4L14-201ENST00000621227 1267 ntBASIC27.38■■□□□ 1.97
SMARCD1Q96GM5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.37■■□□□ 1.97
SMARCD1Q96GM5 ABCB10P1-201ENST00000614297 2181 ntBASIC27.37■■□□□ 1.97
SMARCD1Q96GM5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCD1Q96GM5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SMARCD1Q96GM5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMARCD1Q96GM5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SMARCD1Q96GM5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCD1Q96GM5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.35■■□□□ 1.97
SMARCD1Q96GM5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.35■■□□□ 1.97
SMARCD1Q96GM5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMARCD1Q96GM5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCD1Q96GM5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMARCD1Q96GM5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SMARCD1Q96GM5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.33■■□□□ 1.97
SMARCD1Q96GM5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMARCD1Q96GM5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMARCD1Q96GM5 AC135983.2-203ENST00000454486 1613 ntBASIC27.32■■□□□ 1.96
SMARCD1Q96GM5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.32■■□□□ 1.96
SMARCD1Q96GM5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.32■■□□□ 1.96
SMARCD1Q96GM5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.31■■□□□ 1.96
SMARCD1Q96GM5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
SMARCD1Q96GM5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMARCD1Q96GM5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
SMARCD1Q96GM5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.3■■□□□ 1.96
SMARCD1Q96GM5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.3■■□□□ 1.96
SMARCD1Q96GM5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.3■■□□□ 1.96
SMARCD1Q96GM5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCD1Q96GM5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCD1Q96GM5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCD1Q96GM5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
SMARCD1Q96GM5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCD1Q96GM5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCD1Q96GM5 WHAMMP2-203ENST00000563942 1603 ntBASIC27.28■■□□□ 1.96
SMARCD1Q96GM5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SMARCD1Q96GM5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCD1Q96GM5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L13-201ENST00000554103 1267 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L15-201ENST00000611059 1267 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L23-201ENST00000615195 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L24-201ENST00000617576 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L22-201ENST00000618238 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L20-201ENST00000619712 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L21-201ENST00000622058 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L10-201ENST00000622460 1267 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 DUX4L25-201ENST00000624915 1269 ntBASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCD1Q96GM5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 MIR3648-2-201ENST00000581792 180 ntBASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 MIR3648-1-201ENST00000615959 180 ntBASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 CR559946.2-201ENST00000623684 991 ntBASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.25■■□□□ 1.95
SMARCD1Q96GM5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.24■■□□□ 1.95
SMARCD1Q96GM5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCD1Q96GM5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.24■■□□□ 1.95
SMARCD1Q96GM5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCD1Q96GM5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCD1Q96GM5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCD1Q96GM5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
SMARCD1Q96GM5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
SMARCD1Q96GM5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SMARCD1Q96GM5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCD1Q96GM5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms