Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DUX4L23-201ENST00000615195 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L24-201ENST00000617576 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L22-201ENST00000618238 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L20-201ENST00000619712 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L21-201ENST00000622058 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L10-201ENST00000622460 1267 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L25-201ENST00000624915 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 LINC00273-201ENST00000539813 1452 ntBASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.23■■■□□ 2.59
SH3RF3Q8TEJ3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SH3RF3Q8TEJ3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SH3RF3Q8TEJ3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SH3RF3Q8TEJ3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
SH3RF3Q8TEJ3 AC127502.1-201ENST00000399971 1502 ntBASIC31.19■■■□□ 2.58
SH3RF3Q8TEJ3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
SH3RF3Q8TEJ3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SH3RF3Q8TEJ3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3RF3Q8TEJ3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SH3RF3Q8TEJ3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SH3RF3Q8TEJ3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.14■■■□□ 2.58
SH3RF3Q8TEJ3 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.13■■■□□ 2.57
SH3RF3Q8TEJ3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SH3RF3Q8TEJ3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SH3RF3Q8TEJ3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.1■■■□□ 2.57
SH3RF3Q8TEJ3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SH3RF3Q8TEJ3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.05■■■□□ 2.56
SH3RF3Q8TEJ3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 WHAMMP2-203ENST00000563942 1603 ntBASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
SH3RF3Q8TEJ3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
SH3RF3Q8TEJ3 AC135983.2-203ENST00000454486 1613 ntBASIC31.01■■■□□ 2.55
SH3RF3Q8TEJ3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.96■■■□□ 2.55
SH3RF3Q8TEJ3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
SH3RF3Q8TEJ3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.95■■■□□ 2.55
SH3RF3Q8TEJ3 ST7-AS1-201ENST00000456775 1889 ntBASIC30.95■■■□□ 2.54
SH3RF3Q8TEJ3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SH3RF3Q8TEJ3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SH3RF3Q8TEJ3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SH3RF3Q8TEJ3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH3RF3Q8TEJ3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
SH3RF3Q8TEJ3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SH3RF3Q8TEJ3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.85■■■□□ 2.53
SH3RF3Q8TEJ3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms