Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LNX1Q8TBB1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.41■■■□□ 2.14
LNX1Q8TBB1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LNX1Q8TBB1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
LNX1Q8TBB1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
LNX1Q8TBB1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.4■■■□□ 2.14
LNX1Q8TBB1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.4■■■□□ 2.14
LNX1Q8TBB1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.39■■■□□ 2.14
LNX1Q8TBB1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
LNX1Q8TBB1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.39■■■□□ 2.13
LNX1Q8TBB1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
LNX1Q8TBB1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LNX1Q8TBB1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
LNX1Q8TBB1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
LNX1Q8TBB1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
LNX1Q8TBB1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
LNX1Q8TBB1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
LNX1Q8TBB1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
LNX1Q8TBB1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LNX1Q8TBB1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LNX1Q8TBB1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.36■■■□□ 2.13
LNX1Q8TBB1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
LNX1Q8TBB1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
LNX1Q8TBB1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
LNX1Q8TBB1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LNX1Q8TBB1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
LNX1Q8TBB1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.33■■■□□ 2.12
LNX1Q8TBB1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
LNX1Q8TBB1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.32■■■□□ 2.12
LNX1Q8TBB1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
LNX1Q8TBB1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LNX1Q8TBB1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.31■■■□□ 2.12
LNX1Q8TBB1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
LNX1Q8TBB1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.29■■■□□ 2.12
LNX1Q8TBB1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.29■■■□□ 2.12
LNX1Q8TBB1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LNX1Q8TBB1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LNX1Q8TBB1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
LNX1Q8TBB1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.27■■■□□ 2.12
LNX1Q8TBB1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
LNX1Q8TBB1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
LNX1Q8TBB1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
LNX1Q8TBB1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LNX1Q8TBB1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LNX1Q8TBB1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LNX1Q8TBB1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.25■■■□□ 2.11
LNX1Q8TBB1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LNX1Q8TBB1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LNX1Q8TBB1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
LNX1Q8TBB1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
LNX1Q8TBB1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
LNX1Q8TBB1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.2■■■□□ 2.1
LNX1Q8TBB1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
LNX1Q8TBB1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LNX1Q8TBB1 LINC01971-201ENST00000617888 1048 ntBASIC28.18■■■□□ 2.1
LNX1Q8TBB1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LNX1Q8TBB1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LNX1Q8TBB1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LNX1Q8TBB1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
LNX1Q8TBB1 MIR3648-2-201ENST00000581792 180 ntBASIC28.16■■■□□ 2.1
LNX1Q8TBB1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.16■■■□□ 2.1
LNX1Q8TBB1 DUX4L11-201ENST00000611504 1267 ntBASIC28.16■■■□□ 2.1
LNX1Q8TBB1 DUX4L12-201ENST00000614593 1267 ntBASIC28.16■■■□□ 2.1
LNX1Q8TBB1 MIR3648-1-201ENST00000615959 180 ntBASIC28.16■■■□□ 2.1
LNX1Q8TBB1 DUX4L14-201ENST00000621227 1267 ntBASIC28.16■■■□□ 2.1
LNX1Q8TBB1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
LNX1Q8TBB1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.15■■■□□ 2.1
LNX1Q8TBB1 MIR639-201ENST00000384974 98 ntBASIC28.15■■■□□ 2.1
LNX1Q8TBB1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
LNX1Q8TBB1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.14■■■□□ 2.1
LNX1Q8TBB1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.14■■■□□ 2.1
LNX1Q8TBB1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.13■■■□□ 2.09
LNX1Q8TBB1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.13■■■□□ 2.09
LNX1Q8TBB1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
LNX1Q8TBB1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.12■■■□□ 2.09
LNX1Q8TBB1 AC016575.1-201ENST00000607026 382 ntBASIC28.12■■■□□ 2.09
LNX1Q8TBB1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
LNX1Q8TBB1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LNX1Q8TBB1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LNX1Q8TBB1 MIR4449-201ENST00000578365 66 ntBASIC28.11■■■□□ 2.09
LNX1Q8TBB1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.11■■■□□ 2.09
LNX1Q8TBB1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LNX1Q8TBB1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LNX1Q8TBB1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LNX1Q8TBB1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.09■■■□□ 2.09
LNX1Q8TBB1 AC010864.1-201ENST00000609407 1511 ntBASIC28.08■■■□□ 2.09
LNX1Q8TBB1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
LNX1Q8TBB1 CR559946.2-201ENST00000623684 991 ntBASIC28.08■■■□□ 2.09
LNX1Q8TBB1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
LNX1Q8TBB1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LNX1Q8TBB1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.07■■■□□ 2.08
LNX1Q8TBB1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LNX1Q8TBB1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.06■■■□□ 2.08
LNX1Q8TBB1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms