Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH20Q8N6Y1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH20Q8N6Y1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH20Q8N6Y1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH20Q8N6Y1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDH20Q8N6Y1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
PCDH20Q8N6Y1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH20Q8N6Y1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH20Q8N6Y1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH20Q8N6Y1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.44■■□□□ 1.82
PCDH20Q8N6Y1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDH20Q8N6Y1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH20Q8N6Y1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.42■■□□□ 1.82
PCDH20Q8N6Y1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH20Q8N6Y1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDH20Q8N6Y1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH20Q8N6Y1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH20Q8N6Y1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 ST7-AS1-201ENST00000456775 1889 ntBASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 LINC01971-201ENST00000617888 1048 ntBASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDH20Q8N6Y1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
PCDH20Q8N6Y1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDH20Q8N6Y1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDH20Q8N6Y1 AC127502.1-201ENST00000399971 1502 ntBASIC26.39■■□□□ 1.81
PCDH20Q8N6Y1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH20Q8N6Y1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH20Q8N6Y1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.37■■□□□ 1.81
PCDH20Q8N6Y1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH20Q8N6Y1 LINC00273-201ENST00000539813 1452 ntBASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDH20Q8N6Y1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH20Q8N6Y1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.33■■□□□ 1.81
PCDH20Q8N6Y1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PCDH20Q8N6Y1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH20Q8N6Y1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 DUX4L11-201ENST00000611504 1267 ntBASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 DUX4L12-201ENST00000614593 1267 ntBASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 DUX4L14-201ENST00000621227 1267 ntBASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH20Q8N6Y1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH20Q8N6Y1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH20Q8N6Y1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDH20Q8N6Y1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDH20Q8N6Y1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDH20Q8N6Y1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDH20Q8N6Y1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH20Q8N6Y1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH20Q8N6Y1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH20Q8N6Y1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH20Q8N6Y1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH20Q8N6Y1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PCDH20Q8N6Y1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH20Q8N6Y1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDH20Q8N6Y1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH20Q8N6Y1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDH20Q8N6Y1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH20Q8N6Y1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH20Q8N6Y1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDH20Q8N6Y1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDH20Q8N6Y1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH20Q8N6Y1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH20Q8N6Y1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH20Q8N6Y1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH20Q8N6Y1 DUX4L13-201ENST00000554103 1267 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L15-201ENST00000611059 1267 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L23-201ENST00000615195 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L24-201ENST00000617576 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L22-201ENST00000618238 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L20-201ENST00000619712 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L21-201ENST00000622058 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L10-201ENST00000622460 1267 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 DUX4L25-201ENST00000624915 1269 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 AC135983.2-203ENST00000454486 1613 ntBASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDH20Q8N6Y1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH20Q8N6Y1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms