Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H2BBQ8N257 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
HIST3H2BBQ8N257 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIST3H2BBQ8N257 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST3H2BBQ8N257 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HIST3H2BBQ8N257 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HIST3H2BBQ8N257 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST3H2BBQ8N257 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST3H2BBQ8N257 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST3H2BBQ8N257 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST3H2BBQ8N257 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST3H2BBQ8N257 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST3H2BBQ8N257 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST3H2BBQ8N257 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIST3H2BBQ8N257 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST3H2BBQ8N257 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HIST3H2BBQ8N257 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST3H2BBQ8N257 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 AC020928.2-201ENST00000588717 2197 ntBASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST3H2BBQ8N257 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HIST3H2BBQ8N257 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST3H2BBQ8N257 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST3H2BBQ8N257 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST3H2BBQ8N257 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST3H2BBQ8N257 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.64■□□□□ 0.74
HIST3H2BBQ8N257 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST3H2BBQ8N257 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.64■□□□□ 0.73
HIST3H2BBQ8N257 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST3H2BBQ8N257 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST3H2BBQ8N257 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST3H2BBQ8N257 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST3H2BBQ8N257 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST3H2BBQ8N257 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST3H2BBQ8N257 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST3H2BBQ8N257 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST3H2BBQ8N257 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST3H2BBQ8N257 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST3H2BBQ8N257 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST3H2BBQ8N257 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST3H2BBQ8N257 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST3H2BBQ8N257 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2BBQ8N257 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HIST3H2BBQ8N257 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2BBQ8N257 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2BBQ8N257 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HIST3H2BBQ8N257 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2BBQ8N257 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HIST3H2BBQ8N257 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2BBQ8N257 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2BBQ8N257 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2BBQ8N257 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST3H2BBQ8N257 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
HIST3H2BBQ8N257 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2BBQ8N257 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HIST3H2BBQ8N257 AC133561.1-201ENST00000568600 2415 ntBASIC19.53■□□□□ 0.72
HIST3H2BBQ8N257 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST3H2BBQ8N257 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HIST3H2BBQ8N257 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms