Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.47■■□□□ 1.99
SCN4BQ8IWT1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SCN4BQ8IWT1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.47■■□□□ 1.99
SCN4BQ8IWT1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 MIR3648-2-201ENST00000581792 180 ntBASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 MIR3648-1-201ENST00000615959 180 ntBASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCN4BQ8IWT1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
SCN4BQ8IWT1 AC016575.1-201ENST00000607026 382 ntBASIC27.45■■□□□ 1.98
SCN4BQ8IWT1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SCN4BQ8IWT1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.45■■□□□ 1.98
SCN4BQ8IWT1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 LINC00273-201ENST00000539813 1452 ntBASIC27.44■■□□□ 1.98
SCN4BQ8IWT1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SCN4BQ8IWT1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
SCN4BQ8IWT1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.43■■□□□ 1.98
SCN4BQ8IWT1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.42■■□□□ 1.98
SCN4BQ8IWT1 CR559946.2-201ENST00000623684 991 ntBASIC27.42■■□□□ 1.98
SCN4BQ8IWT1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SCN4BQ8IWT1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SCN4BQ8IWT1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.41■■□□□ 1.98
SCN4BQ8IWT1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.41■■□□□ 1.98
SCN4BQ8IWT1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SCN4BQ8IWT1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
SCN4BQ8IWT1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.39■■□□□ 1.98
SCN4BQ8IWT1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.39■■□□□ 1.98
SCN4BQ8IWT1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SCN4BQ8IWT1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 ST7-AS1-201ENST00000456775 1889 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L13-201ENST00000554103 1267 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L15-201ENST00000611059 1267 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L23-201ENST00000615195 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L24-201ENST00000617576 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L22-201ENST00000618238 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L20-201ENST00000619712 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L21-201ENST00000622058 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L10-201ENST00000622460 1267 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 DUX4L25-201ENST00000624915 1269 ntBASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.38■■□□□ 1.97
SCN4BQ8IWT1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCN4BQ8IWT1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCN4BQ8IWT1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
SCN4BQ8IWT1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
SCN4BQ8IWT1 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.37■■□□□ 1.97
SCN4BQ8IWT1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCN4BQ8IWT1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCN4BQ8IWT1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 MIR639-201ENST00000384974 98 ntBASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SCN4BQ8IWT1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCN4BQ8IWT1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.33■■□□□ 1.97
SCN4BQ8IWT1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCN4BQ8IWT1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCN4BQ8IWT1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SCN4BQ8IWT1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SCN4BQ8IWT1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCN4BQ8IWT1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.32■■□□□ 1.96
SCN4BQ8IWT1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCN4BQ8IWT1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SCN4BQ8IWT1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCN4BQ8IWT1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.29■■□□□ 1.96
SCN4BQ8IWT1 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.29■■□□□ 1.96
SCN4BQ8IWT1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.29■■□□□ 1.96
SCN4BQ8IWT1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCN4BQ8IWT1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SCN4BQ8IWT1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCN4BQ8IWT1 AC135983.2-203ENST00000454486 1613 ntBASIC27.27■■□□□ 1.96
SCN4BQ8IWT1 WHAMMP2-203ENST00000563942 1603 ntBASIC27.27■■□□□ 1.96
SCN4BQ8IWT1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SCN4BQ8IWT1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SCN4BQ8IWT1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
SCN4BQ8IWT1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCN4BQ8IWT1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCN4BQ8IWT1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCN4BQ8IWT1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.25■■□□□ 1.95
SCN4BQ8IWT1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
SCN4BQ8IWT1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.25■■□□□ 1.95
SCN4BQ8IWT1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.25■■□□□ 1.95
SCN4BQ8IWT1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
SCN4BQ8IWT1 MIR4449-201ENST00000578365 66 ntBASIC27.24■■□□□ 1.95
SCN4BQ8IWT1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SCN4BQ8IWT1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.24■■□□□ 1.95
SCN4BQ8IWT1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.23■■□□□ 1.95
SCN4BQ8IWT1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCN4BQ8IWT1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCN4BQ8IWT1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.22■■□□□ 1.95
SCN4BQ8IWT1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
SCN4BQ8IWT1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms