Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF213Q63HN8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF213Q63HN8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF213Q63HN8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RNF213Q63HN8 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF213Q63HN8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.48□□□□□ -0.09
RNF213Q63HN8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF213Q63HN8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF213Q63HN8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF213Q63HN8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF213Q63HN8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF213Q63HN8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF213Q63HN8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.46□□□□□ -0.1
RNF213Q63HN8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF213Q63HN8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF213Q63HN8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF213Q63HN8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF213Q63HN8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF213Q63HN8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF213Q63HN8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF213Q63HN8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RNF213Q63HN8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF213Q63HN8 AL356441.2-201ENST00000443009 864 ntBASIC14.44□□□□□ -0.1
RNF213Q63HN8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF213Q63HN8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF213Q63HN8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF213Q63HN8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF213Q63HN8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF213Q63HN8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF213Q63HN8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF213Q63HN8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF213Q63HN8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF213Q63HN8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF213Q63HN8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF213Q63HN8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF213Q63HN8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF213Q63HN8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF213Q63HN8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF213Q63HN8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF213Q63HN8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF213Q63HN8 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.4□□□□□ -0.1
RNF213Q63HN8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF213Q63HN8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF213Q63HN8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF213Q63HN8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF213Q63HN8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RNF213Q63HN8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF213Q63HN8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF213Q63HN8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF213Q63HN8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF213Q63HN8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF213Q63HN8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF213Q63HN8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF213Q63HN8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RNF213Q63HN8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF213Q63HN8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF213Q63HN8 MIR638-201ENST00000385237 100 ntBASIC14.37□□□□□ -0.11
RNF213Q63HN8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF213Q63HN8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF213Q63HN8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF213Q63HN8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF213Q63HN8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF213Q63HN8 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF213Q63HN8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF213Q63HN8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF213Q63HN8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
RNF213Q63HN8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF213Q63HN8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF213Q63HN8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF213Q63HN8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF213Q63HN8 AC009299.2-201ENST00000482477 511 ntBASIC14.34□□□□□ -0.11
RNF213Q63HN8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF213Q63HN8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF213Q63HN8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF213Q63HN8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF213Q63HN8 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF213Q63HN8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF213Q63HN8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF213Q63HN8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF213Q63HN8 GUSBP5-201ENST00000418136 578 ntBASIC14.32□□□□□ -0.12
RNF213Q63HN8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
RNF213Q63HN8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF213Q63HN8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF213Q63HN8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF213Q63HN8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF213Q63HN8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF213Q63HN8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF213Q63HN8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF213Q63HN8 KRT8P33-201ENST00000508125 1423 ntBASIC14.3□□□□□ -0.12
RNF213Q63HN8 AC060814.1-201ENST00000554326 538 ntBASIC14.3□□□□□ -0.12
RNF213Q63HN8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RNF213Q63HN8 AC008406.3-201ENST00000620001 1374 ntBASIC14.3□□□□□ -0.12
RNF213Q63HN8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF213Q63HN8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF213Q63HN8 RP9P-202ENST00000450133 1212 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms