Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC016575.1-201ENST00000607026 382 ntBASIC30.01■■■□□ 2.39
USH1GQ495M9 MIR3648-1-201ENST00000615959 180 ntBASIC30.01■■■□□ 2.39
USH1GQ495M9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.01■■■□□ 2.39
USH1GQ495M9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
USH1GQ495M9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
USH1GQ495M9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30■■■□□ 2.39
USH1GQ495M9 CR559946.2-201ENST00000623684 991 ntBASIC30■■■□□ 2.39
USH1GQ495M9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.98■■■□□ 2.39
USH1GQ495M9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.98■■■□□ 2.39
USH1GQ495M9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
USH1GQ495M9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.97■■■□□ 2.39
USH1GQ495M9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.97■■■□□ 2.39
USH1GQ495M9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
USH1GQ495M9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
USH1GQ495M9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
USH1GQ495M9 LINC00273-201ENST00000539813 1452 ntBASIC29.96■■■□□ 2.39
USH1GQ495M9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
USH1GQ495M9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.96■■■□□ 2.39
USH1GQ495M9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
USH1GQ495M9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
USH1GQ495M9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.96■■■□□ 2.39
USH1GQ495M9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.95■■■□□ 2.39
USH1GQ495M9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
USH1GQ495M9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
USH1GQ495M9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
USH1GQ495M9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
USH1GQ495M9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.94■■■□□ 2.38
USH1GQ495M9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.93■■■□□ 2.38
USH1GQ495M9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
USH1GQ495M9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
USH1GQ495M9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
USH1GQ495M9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
USH1GQ495M9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L13-201ENST00000554103 1267 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L15-201ENST00000611059 1267 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L23-201ENST00000615195 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L24-201ENST00000617576 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L22-201ENST00000618238 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L20-201ENST00000619712 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L21-201ENST00000622058 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L10-201ENST00000622460 1267 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 DUX4L25-201ENST00000624915 1269 ntBASIC29.9■■■□□ 2.38
USH1GQ495M9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
USH1GQ495M9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
USH1GQ495M9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
USH1GQ495M9 ST7-AS1-201ENST00000456775 1889 ntBASIC29.89■■■□□ 2.38
USH1GQ495M9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
USH1GQ495M9 MIR639-201ENST00000384974 98 ntBASIC29.89■■■□□ 2.38
USH1GQ495M9 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.89■■■□□ 2.38
USH1GQ495M9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
USH1GQ495M9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.88■■■□□ 2.37
USH1GQ495M9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.88■■■□□ 2.37
USH1GQ495M9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
USH1GQ495M9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
USH1GQ495M9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.87■■■□□ 2.37
USH1GQ495M9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.87■■■□□ 2.37
USH1GQ495M9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
USH1GQ495M9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.86■■■□□ 2.37
USH1GQ495M9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
USH1GQ495M9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
USH1GQ495M9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
USH1GQ495M9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
USH1GQ495M9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
USH1GQ495M9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
USH1GQ495M9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.82■■■□□ 2.36
USH1GQ495M9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
USH1GQ495M9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
USH1GQ495M9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
USH1GQ495M9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.82■■■□□ 2.36
USH1GQ495M9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
USH1GQ495M9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
USH1GQ495M9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
USH1GQ495M9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.81■■■□□ 2.36
USH1GQ495M9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
USH1GQ495M9 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.8■■■□□ 2.36
USH1GQ495M9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.8■■■□□ 2.36
USH1GQ495M9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
USH1GQ495M9 MIR4449-201ENST00000578365 66 ntBASIC29.8■■■□□ 2.36
USH1GQ495M9 WHAMMP2-203ENST00000563942 1603 ntBASIC29.8■■■□□ 2.36
USH1GQ495M9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
USH1GQ495M9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
USH1GQ495M9 AC135983.2-203ENST00000454486 1613 ntBASIC29.78■■■□□ 2.36
USH1GQ495M9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
USH1GQ495M9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
USH1GQ495M9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
USH1GQ495M9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
USH1GQ495M9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
USH1GQ495M9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.75■■■□□ 2.35
USH1GQ495M9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.74■■■□□ 2.35
USH1GQ495M9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.74■■■□□ 2.35
USH1GQ495M9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.74■■■□□ 2.35
USH1GQ495M9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
USH1GQ495M9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
USH1GQ495M9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
USH1GQ495M9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
USH1GQ495M9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
USH1GQ495M9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
USH1GQ495M9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
USH1GQ495M9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.7■■■□□ 2.35
USH1GQ495M9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms