Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 tA(UGC)LtA(UGC)L 73 nt8.92□□□□□ -0.98
DNL4Q08387 tA(UGC)OtA(UGC)O 73 nt8.92□□□□□ -0.98
DNL4Q08387 REX2YLR059C 810 nt8.91□□□□□ -0.98
DNL4Q08387 YLR280CYLR280C 351 nt8.9□□□□□ -0.98
DNL4Q08387 snR31snR31 225 nt8.9□□□□□ -0.98
DNL4Q08387 ERO1YML130C 1692 nt8.9□□□□□ -0.98
DNL4Q08387 DLD3YEL071W 1491 nt8.89□□□□□ -0.99
DNL4Q08387 HIS2YFR025C 1008 nt8.89□□□□□ -0.99
DNL4Q08387 CYT1YOR065W 930 nt8.89□□□□□ -0.99
DNL4Q08387 FCY1YPR062W 477 nt8.89□□□□□ -0.99
DNL4Q08387 ITR2YOL103W 1830 nt8.89□□□□□ -0.99
DNL4Q08387 TPN1YGL186C 1740 nt8.88□□□□□ -0.99
DNL4Q08387 YGR210CYGR210C 1236 nt8.88□□□□□ -0.99
DNL4Q08387 SFL1YOR140W 2301 nt8.88□□□□□ -0.99
DNL4Q08387 VBA3YCL069W 1377 nt8.87□□□□□ -0.99
DNL4Q08387 ARO8YGL202W 1503 nt8.87□□□□□ -0.99
DNL4Q08387 MET1YKR069W 1782 nt8.86□□□□□ -0.99
DNL4Q08387 UGP1YKL035W 1500 nt8.86□□□□□ -0.99
DNL4Q08387 MDL2YPL270W 2322 nt8.86□□□□□ -0.99
DNL4Q08387 YOR072WYOR072W 315 nt8.86□□□□□ -0.99
DNL4Q08387 HAP5YOR358W 729 nt8.86□□□□□ -0.99
DNL4Q08387 SUV3YPL029W 2214 nt8.85□□□□□ -0.99
DNL4Q08387 RPN14YGL004C 1254 nt8.85□□□□□ -0.99
DNL4Q08387 YMR265CYMR265C 1386 nt8.85□□□□□ -0.99
DNL4Q08387 SRP54YPR088C 1626 nt8.84□□□□□ -0.99
DNL4Q08387 VMA11YPL234C 495 nt8.83□□□□□ -1
DNL4Q08387 COQ8YGL119W 1506 nt8.83□□□□□ -1
DNL4Q08387 FRA1YLL029W 2250 nt8.82□□□□□ -1
DNL4Q08387 YKL053WYKL053W 375 nt8.82□□□□□ -1
DNL4Q08387 YOR343CYOR343C 327 nt8.82□□□□□ -1
DNL4Q08387 TOM71YHR117W 1920 nt8.82□□□□□ -1
DNL4Q08387 KES1YPL145C 1305 nt8.81□□□□□ -1
DNL4Q08387 PAU21YOR394W 495 nt8.81□□□□□ -1
DNL4Q08387 YPL108WYPL108W 507 nt8.81□□□□□ -1
DNL4Q08387 PAU22YPL282C 495 nt8.81□□□□□ -1
DNL4Q08387 GID8YMR135C 1368 nt8.81□□□□□ -1
DNL4Q08387 YPT11YNL304W 1254 nt8.8□□□□□ -1
DNL4Q08387 CRC1YOR100C 984 nt8.8□□□□□ -1
DNL4Q08387 GRH1YDR517W 1119 nt8.79□□□□□ -1
DNL4Q08387 RIM2YBR192W 1134 nt8.79□□□□□ -1
DNL4Q08387 HRA1HRA1 564 nt8.78□□□□□ -1
DNL4Q08387 LSR1LSR1 1175 nt8.77□□□□□ -1.01
DNL4Q08387 SGA1YIL099W 1650 nt8.77□□□□□ -1.01
DNL4Q08387 MEX67YPL169C 1800 nt8.77□□□□□ -1.01
DNL4Q08387 YHR219WYHR219W 1875 nt8.77□□□□□ -1.01
DNL4Q08387 RPL12BYDR418W 498 nt8.76□□□□□ -1.01
DNL4Q08387 YFR020WYFR020W 699 nt8.76□□□□□ -1.01
DNL4Q08387 SAN1YDR143C 1833 nt8.75□□□□□ -1.01
DNL4Q08387 YKL133CYKL133C 1392 nt8.75□□□□□ -1.01
DNL4Q08387 YJL160CYJL160C 864 nt8.75□□□□□ -1.01
DNL4Q08387 YAL016C-AYAL016C-A 315 nt8.74□□□□□ -1.01
DNL4Q08387 RSM7YJR113C 744 nt8.74□□□□□ -1.01
DNL4Q08387 EMC3YKL207W 762 nt8.74□□□□□ -1.01
DNL4Q08387 SNX3YOR357C 489 nt8.74□□□□□ -1.01
DNL4Q08387 DMA2YNL116W 1569 nt8.73□□□□□ -1.01
DNL4Q08387 MRS6YOR370C 1812 nt8.73□□□□□ -1.01
DNL4Q08387 ZAP1YJL056C 2643 nt8.72□□□□□ -1.01
DNL4Q08387 RPD3YNL330C 1302 nt8.72□□□□□ -1.01
DNL4Q08387 YMR210WYMR210W 1350 nt8.71□□□□□ -1.02
DNL4Q08387 KGD2YDR148C 1392 nt8.7□□□□□ -1.02
DNL4Q08387 YMR166CYMR166C 1107 nt8.69□□□□□ -1.02
DNL4Q08387 LSP1YPL004C 1026 nt8.69□□□□□ -1.02
DNL4Q08387 GAS1YMR307W 1680 nt8.69□□□□□ -1.02
DNL4Q08387 MRP1YDR347W 966 nt8.68□□□□□ -1.02
DNL4Q08387 ALR1YOL130W 2580 nt8.68□□□□□ -1.02
DNL4Q08387 LPD1YFL018C 1500 nt8.68□□□□□ -1.02
DNL4Q08387 PTC6YCR079W 1329 nt8.67□□□□□ -1.02
DNL4Q08387 SBP1YHL034C 885 nt8.67□□□□□ -1.02
DNL4Q08387 UFD1YGR048W 1086 nt8.64□□□□□ -1.03
DNL4Q08387 YLR460CYLR460C 1131 nt8.64□□□□□ -1.03
DNL4Q08387 NSG2YNL156C 900 nt8.64□□□□□ -1.03
DNL4Q08387 YHR218WYHR218W 1812 nt8.64□□□□□ -1.03
DNL4Q08387 KRR1YCL059C 951 nt8.63□□□□□ -1.03
DNL4Q08387 PET18YCR020C 648 nt8.63□□□□□ -1.03
DNL4Q08387 YOR268CYOR268C 399 nt8.62□□□□□ -1.03
DNL4Q08387 MFT1YML062C 1179 nt8.61□□□□□ -1.03
DNL4Q08387 RRT14YIL127C 621 nt8.6□□□□□ -1.03
DNL4Q08387 THI6YPL214C 1623 nt8.6□□□□□ -1.03
DNL4Q08387 GDH1YOR375C 1365 nt8.6□□□□□ -1.03
DNL4Q08387 CAK1YFL029C 1107 nt8.59□□□□□ -1.03
DNL4Q08387 CHS7YHR142W 951 nt8.59□□□□□ -1.03
DNL4Q08387 CWP2YKL096W-A 279 nt8.59□□□□□ -1.03
DNL4Q08387 SSL2YIL143C 2532 nt8.58□□□□□ -1.04
DNL4Q08387 ADA2YDR448W 1305 nt8.58□□□□□ -1.04
DNL4Q08387 RPC31YNL151C 756 nt8.58□□□□□ -1.04
DNL4Q08387 RSC4YKR008W 1878 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)B1tL(UAA)B1 84 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)B2tL(UAA)B2 84 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)DtL(UAA)D 84 nt8.57□□□□□ -1.04
DNL4Q08387 SUP51tL(UAA)J 84 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)KtL(UAA)K 84 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)LtL(UAA)L 84 nt8.57□□□□□ -1.04
DNL4Q08387 tL(UAA)NtL(UAA)N 84 nt8.57□□□□□ -1.04
DNL4Q08387 OCH1YGL038C 1443 nt8.56□□□□□ -1.04
DNL4Q08387 EDC2YER035W 438 nt8.56□□□□□ -1.04
DNL4Q08387 UTR5YEL035C 501 nt8.55□□□□□ -1.04
DNL4Q08387 YER156CYER156C 1017 nt8.55□□□□□ -1.04
DNL4Q08387 TAD2YJL035C 753 nt8.55□□□□□ -1.04
DNL4Q08387 YPR084WYPR084W 1371 nt8.54□□□□□ -1.04
DNL4Q08387 ODC1YPL134C 933 nt8.54□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 64 ms