Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ADH3YMR083W 1128 nt8□□□□□ -1.13
RRP40Q08285 IPL1YPL209C 1104 nt8□□□□□ -1.13
RRP40Q08285 FLX1YIL134W 936 nt7.99□□□□□ -1.13
RRP40Q08285 YKL053WYKL053W 375 nt7.99□□□□□ -1.13
RRP40Q08285 YOR072WYOR072W 315 nt7.99□□□□□ -1.13
RRP40Q08285 TIM44YIL022W 1296 nt7.98□□□□□ -1.13
RRP40Q08285 KRR1YCL059C 951 nt7.97□□□□□ -1.13
RRP40Q08285 YKR012CYKR012C 378 nt7.97□□□□□ -1.13
RRP40Q08285 REX2YLR059C 810 nt7.97□□□□□ -1.13
RRP40Q08285 RPC31YNL151C 756 nt7.97□□□□□ -1.13
RRP40Q08285 SLG1YOR008C 1137 nt7.96□□□□□ -1.14
RRP40Q08285 RIM2YBR192W 1134 nt7.96□□□□□ -1.14
RRP40Q08285 SAN1YDR143C 1833 nt7.95□□□□□ -1.14
RRP40Q08285 SDS24YBR214W 1584 nt7.94□□□□□ -1.14
RRP40Q08285 SRP54YPR088C 1626 nt7.94□□□□□ -1.14
RRP40Q08285 YCR025CYCR025C 411 nt7.94□□□□□ -1.14
RRP40Q08285 MOB1YIL106W 945 nt7.93□□□□□ -1.14
RRP40Q08285 KGD2YDR148C 1392 nt7.93□□□□□ -1.14
RRP40Q08285 DPL1YDR294C 1770 nt7.92□□□□□ -1.14
RRP40Q08285 MDM35YKL053C-A 261 nt7.92□□□□□ -1.14
RRP40Q08285 VBA3YCL069W 1377 nt7.91□□□□□ -1.14
RRP40Q08285 CYC3YAL039C 810 nt7.89□□□□□ -1.15
RRP40Q08285 ENO1YGR254W 1314 nt7.88□□□□□ -1.15
RRP40Q08285 MEX67YPL169C 1800 nt7.88□□□□□ -1.15
RRP40Q08285 YPT11YNL304W 1254 nt7.88□□□□□ -1.15
RRP40Q08285 FRA1YLL029W 2250 nt7.88□□□□□ -1.15
RRP40Q08285 HXT10YFL011W 1641 nt7.88□□□□□ -1.15
RRP40Q08285 YCP4YCR004C 744 nt7.87□□□□□ -1.15
RRP40Q08285 SBP1YHL034C 885 nt7.87□□□□□ -1.15
RRP40Q08285 RSC4YKR008W 1878 nt7.87□□□□□ -1.15
RRP40Q08285 MTO1YGL236C 2010 nt7.86□□□□□ -1.15
RRP40Q08285 SRP102YKL154W 735 nt7.86□□□□□ -1.15
RRP40Q08285 MDL2YPL270W 2322 nt7.85□□□□□ -1.15
RRP40Q08285 LYS20YDL182W 1287 nt7.85□□□□□ -1.15
RRP40Q08285 SER2YGR208W 930 nt7.85□□□□□ -1.15
RRP40Q08285 TPN1YGL186C 1740 nt7.85□□□□□ -1.15
RRP40Q08285 SAM50YNL026W 1455 nt7.85□□□□□ -1.15
RRP40Q08285 GAS1YMR307W 1680 nt7.84□□□□□ -1.15
RRP40Q08285 SWM1YDR260C 513 nt7.84□□□□□ -1.15
RRP40Q08285 TOM71YHR117W 1920 nt7.84□□□□□ -1.16
RRP40Q08285 PTC6YCR079W 1329 nt7.82□□□□□ -1.16
RRP40Q08285 HTS1YPR033C 1641 nt7.81□□□□□ -1.16
RRP40Q08285 LEU4YNL104C 1860 nt7.81□□□□□ -1.16
RRP40Q08285 YFR020WYFR020W 699 nt7.81□□□□□ -1.16
RRP40Q08285 YLR280CYLR280C 351 nt7.81□□□□□ -1.16
RRP40Q08285 ERO1YML130C 1692 nt7.81□□□□□ -1.16
RRP40Q08285 GGA2YHR108W 1758 nt7.8□□□□□ -1.16
RRP40Q08285 NBA1YOL070C 1506 nt7.8□□□□□ -1.16
RRP40Q08285 YDR467CYDR467C 327 nt7.8□□□□□ -1.16
RRP40Q08285 YMR316C-BYMR316C-B 309 nt7.8□□□□□ -1.16
RRP40Q08285 NSG2YNL156C 900 nt7.8□□□□□ -1.16
RRP40Q08285 THI3YDL080C 1830 nt7.8□□□□□ -1.16
RRP40Q08285 YRF1-2YER190W 5046 nt7.79□□□□□ -1.16
RRP40Q08285 GPM1YKL152C 744 nt7.79□□□□□ -1.16
RRP40Q08285 tE(CUC)DtE(CUC)D 72 nt7.78□□□□□ -1.16
RRP40Q08285 tE(CUC)ItE(CUC)I 72 nt7.78□□□□□ -1.16
RRP40Q08285 RSM7YJR113C 744 nt7.78□□□□□ -1.16
RRP40Q08285 TGA1tA(UGC)A 73 nt7.77□□□□□ -1.17
RRP40Q08285 tA(UGC)EtA(UGC)E 73 nt7.77□□□□□ -1.17
RRP40Q08285 tA(UGC)GtA(UGC)G 73 nt7.77□□□□□ -1.17
RRP40Q08285 tA(UGC)LtA(UGC)L 73 nt7.77□□□□□ -1.17
RRP40Q08285 tA(UGC)OtA(UGC)O 73 nt7.77□□□□□ -1.17
RRP40Q08285 INH1YDL181W 258 nt7.76□□□□□ -1.17
RRP40Q08285 YGR210CYGR210C 1236 nt7.76□□□□□ -1.17
RRP40Q08285 AGP3YFL055W 1677 nt7.75□□□□□ -1.17
RRP40Q08285 YIA6YIL006W 1122 nt7.74□□□□□ -1.17
RRP40Q08285 YBL095WYBL095W 813 nt7.74□□□□□ -1.17
RRP40Q08285 YMR007WYMR007W 381 nt7.73□□□□□ -1.17
RRP40Q08285 RIB1YBL033C 1038 nt7.72□□□□□ -1.17
RRP40Q08285 YPL108WYPL108W 507 nt7.71□□□□□ -1.18
RRP40Q08285 UFD1YGR048W 1086 nt7.7□□□□□ -1.18
RRP40Q08285 AAC3YBR085W 924 nt7.7□□□□□ -1.18
RRP40Q08285 NPP2YEL016C 1482 nt7.69□□□□□ -1.18
RRP40Q08285 MIM1YOL026C 342 nt7.69□□□□□ -1.18
RRP40Q08285 FCY1YPR062W 477 nt7.69□□□□□ -1.18
RRP40Q08285 SOD2YHR008C 702 nt7.68□□□□□ -1.18
RRP40Q08285 YMR166CYMR166C 1107 nt7.68□□□□□ -1.18
RRP40Q08285 TMS1YDR105C 1422 nt7.68□□□□□ -1.18
RRP40Q08285 tD(GUC)BtD(GUC)B 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)DtD(GUC)D 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)G1tD(GUC)G1 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)G2tD(GUC)G2 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)I1tD(GUC)I1 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)I2tD(GUC)I2 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)J1tD(GUC)J1 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)J2tD(GUC)J2 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)J3tD(GUC)J3 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)J4tD(GUC)J4 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)KtD(GUC)K 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)L1tD(GUC)L1 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)L2tD(GUC)L2 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)MtD(GUC)M 72 nt7.67□□□□□ -1.18
RRP40Q08285 tD(GUC)OtD(GUC)O 72 nt7.67□□□□□ -1.18
RRP40Q08285 YLR460CYLR460C 1131 nt7.67□□□□□ -1.18
RRP40Q08285 RCR1YBR005W 642 nt7.66□□□□□ -1.18
RRP40Q08285 YMC2YBR104W 990 nt7.66□□□□□ -1.18
RRP40Q08285 FIT1YDR534C 1587 nt7.66□□□□□ -1.18
RRP40Q08285 MRS4YKR052C 915 nt7.65□□□□□ -1.18
RRP40Q08285 ERG6YML008C 1152 nt7.65□□□□□ -1.18
RRP40Q08285 CHS7YHR142W 951 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 46.3 ms