Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 tA(AGC)K2tA(AGC)K2 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)LtA(AGC)L 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)M1tA(AGC)M1 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)M2tA(AGC)M2 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)PtA(AGC)P 73 nt8.32□□□□□ -1.08
VTA1Q06263 RIM2YBR192W 1134 nt8.32□□□□□ -1.08
VTA1Q06263 FLX1YIL134W 936 nt8.31□□□□□ -1.08
VTA1Q06263 CRC1YOR100C 984 nt8.31□□□□□ -1.08
VTA1Q06263 NME1NME1 340 nt8.31□□□□□ -1.08
VTA1Q06263 HXT10YFL011W 1641 nt8.31□□□□□ -1.08
VTA1Q06263 YRF1-3YGR296W 5580 nt8.3□□□□□ -1.08
VTA1Q06263 YRF1-6YNL339C 5580 nt8.3□□□□□ -1.08
VTA1Q06263 YRF1-7YPL283C 5580 nt8.3□□□□□ -1.08
VTA1Q06263 MEX67YPL169C 1800 nt8.29□□□□□ -1.08
VTA1Q06263 MTO1YGL236C 2010 nt8.29□□□□□ -1.08
VTA1Q06263 YCR025CYCR025C 411 nt8.29□□□□□ -1.08
VTA1Q06263 YKR012CYKR012C 378 nt8.29□□□□□ -1.08
VTA1Q06263 REX2YLR059C 810 nt8.29□□□□□ -1.08
VTA1Q06263 TOK1YJL093C 2076 nt8.28□□□□□ -1.08
VTA1Q06263 MCM5YLR274W 2328 nt8.28□□□□□ -1.08
VTA1Q06263 PHB2YGR231C 933 nt8.28□□□□□ -1.08
VTA1Q06263 ADH3YMR083W 1128 nt8.28□□□□□ -1.08
VTA1Q06263 Q0010Q0010 387 nt8.28□□□□□ -1.08
VTA1Q06263 DPL1YDR294C 1770 nt8.27□□□□□ -1.08
VTA1Q06263 YKL053WYKL053W 375 nt8.27□□□□□ -1.09
VTA1Q06263 SRP54YPR088C 1626 nt8.27□□□□□ -1.09
VTA1Q06263 MDL2YPL270W 2322 nt8.27□□□□□ -1.09
VTA1Q06263 MOB1YIL106W 945 nt8.26□□□□□ -1.09
VTA1Q06263 CYC3YAL039C 810 nt8.26□□□□□ -1.09
VTA1Q06263 SDS24YBR214W 1584 nt8.26□□□□□ -1.09
VTA1Q06263 AGP3YFL055W 1677 nt8.25□□□□□ -1.09
VTA1Q06263 YPT11YNL304W 1254 nt8.25□□□□□ -1.09
VTA1Q06263 SLG1YOR008C 1137 nt8.25□□□□□ -1.09
VTA1Q06263 SAN1YDR143C 1833 nt8.24□□□□□ -1.09
VTA1Q06263 ENO1YGR254W 1314 nt8.24□□□□□ -1.09
VTA1Q06263 YCP4YCR004C 744 nt8.23□□□□□ -1.09
VTA1Q06263 SBP1YHL034C 885 nt8.22□□□□□ -1.09
VTA1Q06263 VBA3YCL069W 1377 nt8.22□□□□□ -1.09
VTA1Q06263 KGD2YDR148C 1392 nt8.22□□□□□ -1.09
VTA1Q06263 SRP102YKL154W 735 nt8.21□□□□□ -1.1
VTA1Q06263 INH1YDL181W 258 nt8.2□□□□□ -1.1
VTA1Q06263 LYS20YDL182W 1287 nt8.2□□□□□ -1.1
VTA1Q06263 YJR154WYJR154W 1041 nt8.2□□□□□ -1.1
VTA1Q06263 YIL177CYIL177C 5277 nt8.2□□□□□ -1.1
VTA1Q06263 LEU4YNL104C 1860 nt8.19□□□□□ -1.1
VTA1Q06263 SER2YGR208W 930 nt8.18□□□□□ -1.1
VTA1Q06263 NBA1YOL070C 1506 nt8.17□□□□□ -1.1
VTA1Q06263 HTS1YPR033C 1641 nt8.17□□□□□ -1.1
VTA1Q06263 GAS1YMR307W 1680 nt8.17□□□□□ -1.1
VTA1Q06263 YDR306CYDR306C 1437 nt8.16□□□□□ -1.1
VTA1Q06263 RSM7YJR113C 744 nt8.16□□□□□ -1.1
VTA1Q06263 SAM50YNL026W 1455 nt8.16□□□□□ -1.1
VTA1Q06263 tE(CUC)DtE(CUC)D 72 nt8.15□□□□□ -1.1
VTA1Q06263 tE(CUC)ItE(CUC)I 72 nt8.15□□□□□ -1.1
VTA1Q06263 PTC6YCR079W 1329 nt8.14□□□□□ -1.11
VTA1Q06263 YDR467CYDR467C 327 nt8.14□□□□□ -1.11
VTA1Q06263 YLR280CYLR280C 351 nt8.14□□□□□ -1.11
VTA1Q06263 HEM14YER014W 1620 nt8.14□□□□□ -1.11
VTA1Q06263 GGA2YHR108W 1758 nt8.13□□□□□ -1.11
VTA1Q06263 SWM1YDR260C 513 nt8.13□□□□□ -1.11
VTA1Q06263 YFR020WYFR020W 699 nt8.13□□□□□ -1.11
VTA1Q06263 ERO1YML130C 1692 nt8.13□□□□□ -1.11
VTA1Q06263 YIA6YIL006W 1122 nt8.11□□□□□ -1.11
VTA1Q06263 YMR316C-BYMR316C-B 309 nt8.11□□□□□ -1.11
VTA1Q06263 UFD1YGR048W 1086 nt8.1□□□□□ -1.11
VTA1Q06263 GPM1YKL152C 744 nt8.1□□□□□ -1.11
VTA1Q06263 YMR007WYMR007W 381 nt8.1□□□□□ -1.11
VTA1Q06263 NPP2YEL016C 1482 nt8.1□□□□□ -1.11
VTA1Q06263 RIB1YBL033C 1038 nt8.08□□□□□ -1.12
VTA1Q06263 RSC4YKR008W 1878 nt8.08□□□□□ -1.12
VTA1Q06263 YGR210CYGR210C 1236 nt8.07□□□□□ -1.12
VTA1Q06263 RCR1YBR005W 642 nt8.07□□□□□ -1.12
VTA1Q06263 THI3YDL080C 1830 nt8.07□□□□□ -1.12
VTA1Q06263 YLR460CYLR460C 1131 nt8.06□□□□□ -1.12
VTA1Q06263 LPD1YFL018C 1500 nt8.05□□□□□ -1.12
VTA1Q06263 FET5YFL041W 1869 nt8.05□□□□□ -1.12
VTA1Q06263 YBL095WYBL095W 813 nt8.05□□□□□ -1.12
VTA1Q06263 MIM1YOL026C 342 nt8.05□□□□□ -1.12
VTA1Q06263 TPN1YGL186C 1740 nt8.05□□□□□ -1.12
VTA1Q06263 YPL108WYPL108W 507 nt8.04□□□□□ -1.12
VTA1Q06263 FIT1YDR534C 1587 nt8.04□□□□□ -1.12
VTA1Q06263 TGA1tA(UGC)A 73 nt8.03□□□□□ -1.12
VTA1Q06263 tA(UGC)EtA(UGC)E 73 nt8.03□□□□□ -1.12
VTA1Q06263 tA(UGC)GtA(UGC)G 73 nt8.03□□□□□ -1.12
VTA1Q06263 tA(UGC)LtA(UGC)L 73 nt8.03□□□□□ -1.12
VTA1Q06263 tA(UGC)OtA(UGC)O 73 nt8.03□□□□□ -1.12
VTA1Q06263 tD(GUC)BtD(GUC)B 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)DtD(GUC)D 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)G1tD(GUC)G1 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)G2tD(GUC)G2 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)I1tD(GUC)I1 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)I2tD(GUC)I2 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)J1tD(GUC)J1 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)J2tD(GUC)J2 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)J3tD(GUC)J3 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)J4tD(GUC)J4 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)KtD(GUC)K 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)L1tD(GUC)L1 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)L2tD(GUC)L2 72 nt8.02□□□□□ -1.13
VTA1Q06263 tD(GUC)MtD(GUC)M 72 nt8.02□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms