Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.02□□□□□ -0.17
SEC61BP60468 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SEC61BP60468 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SEC61BP60468 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61BP60468 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61BP60468 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61BP60468 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14□□□□□ -0.17
SEC61BP60468 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14□□□□□ -0.17
SEC61BP60468 LINC00273-201ENST00000539813 1452 ntBASIC14□□□□□ -0.17
SEC61BP60468 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61BP60468 AL161658.1-201ENST00000623641 1967 ntBASIC14□□□□□ -0.17
SEC61BP60468 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14□□□□□ -0.17
SEC61BP60468 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SEC61BP60468 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC13.99□□□□□ -0.17
SEC61BP60468 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SEC61BP60468 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61BP60468 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61BP60468 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SEC61BP60468 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61BP60468 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61BP60468 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61BP60468 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61BP60468 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61BP60468 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61BP60468 AC010864.1-201ENST00000609407 1511 ntBASIC13.97□□□□□ -0.17
SEC61BP60468 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61BP60468 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.97□□□□□ -0.17
SEC61BP60468 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61BP60468 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC13.96□□□□□ -0.17
SEC61BP60468 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SEC61BP60468 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61BP60468 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61BP60468 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61BP60468 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61BP60468 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61BP60468 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61BP60468 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SEC61BP60468 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61BP60468 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SEC61BP60468 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61BP60468 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61BP60468 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SEC61BP60468 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.93□□□□□ -0.18
SEC61BP60468 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC13.93□□□□□ -0.18
SEC61BP60468 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.93□□□□□ -0.18
SEC61BP60468 AC008813.1-201ENST00000536597 885 ntBASIC13.93□□□□□ -0.18
SEC61BP60468 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SEC61BP60468 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61BP60468 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SEC61BP60468 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61BP60468 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61BP60468 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SEC61BP60468 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61BP60468 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61BP60468 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SEC61BP60468 HES4-202ENST00000428771 1040 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61BP60468 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61BP60468 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61BP60468 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61BP60468 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61BP60468 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SEC61BP60468 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61BP60468 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.9□□□□□ -0.18
SEC61BP60468 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SEC61BP60468 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61BP60468 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61BP60468 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61BP60468 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61BP60468 GPX1-201ENST00000419349 1106 ntBASIC13.89□□□□□ -0.19
SEC61BP60468 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.89□□□□□ -0.19
SEC61BP60468 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61BP60468 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SEC61BP60468 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61BP60468 RARRES2P2-201ENST00000394842 485 ntBASIC13.88□□□□□ -0.19
SEC61BP60468 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61BP60468 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC61BP60468 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61BP60468 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61BP60468 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61BP60468 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC61BP60468 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
SEC61BP60468 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC61BP60468 RNF126P1-201ENST00000567452 1320 ntBASIC13.87□□□□□ -0.19
SEC61BP60468 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61BP60468 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC61BP60468 ABHD17AP5-201ENST00000580133 923 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms