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Protein–RNA interactions for Protein: P53202
CUL3, Cullin-3, yeast
Predictions only
Length
744 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
CUL3
P53202
TGA1
tA(UGC)A
73 nt
8.99
□□□□□ -0.97
CUL3
P53202
tA(UGC)E
tA(UGC)E
73 nt
8.99
□□□□□ -0.97
CUL3
P53202
tA(UGC)G
tA(UGC)G
73 nt
8.99
□□□□□ -0.97
CUL3
P53202
tA(UGC)L
tA(UGC)L
73 nt
8.99
□□□□□ -0.97
CUL3
P53202
tA(UGC)O
tA(UGC)O
73 nt
8.99
□□□□□ -0.97
CUL3
P53202
POP2
YNR052C
1302 nt
8.99
□□□□□ -0.97
CUL3
P53202
SAN1
YDR143C
1833 nt
8.98
□□□□□ -0.97
CUL3
P53202
UGP1
YKL035W
1500 nt
8.97
□□□□□ -0.97
CUL3
P53202
HIS2
YFR025C
1008 nt
8.97
□□□□□ -0.97
CUL3
P53202
YGR210C
YGR210C
1236 nt
8.97
□□□□□ -0.97
CUL3
P53202
RCR1
YBR005W
642 nt
8.97
□□□□□ -0.97
CUL3
P53202
YER152W-A
YER152W-A
567 nt
8.96
□□□□□ -0.98
CUL3
P53202
YPT11
YNL304W
1254 nt
8.95
□□□□□ -0.98
CUL3
P53202
RIM2
YBR192W
1134 nt
8.95
□□□□□ -0.98
CUL3
P53202
KGD2
YDR148C
1392 nt
8.95
□□□□□ -0.98
CUL3
P53202
FCY1
YPR062W
477 nt
8.94
□□□□□ -0.98
CUL3
P53202
GID7
YCL039W
2238 nt
8.92
□□□□□ -0.98
CUL3
P53202
MAE1
YKL029C
2010 nt
8.92
□□□□□ -0.98
CUL3
P53202
CWP2
YKL096W-A
279 nt
8.92
□□□□□ -0.98
CUL3
P53202
RIM8
YGL045W
1629 nt
8.91
□□□□□ -0.98
CUL3
P53202
YFR020W
YFR020W
699 nt
8.91
□□□□□ -0.98
CUL3
P53202
YPL108W
YPL108W
507 nt
8.9
□□□□□ -0.98
CUL3
P53202
NPP1
YCR026C
2229 nt
8.9
□□□□□ -0.98
CUL3
P53202
SSL2
YIL143C
2532 nt
8.89
□□□□□ -0.99
CUL3
P53202
KRR1
YCL059C
951 nt
8.88
□□□□□ -0.99
CUL3
P53202
SBP1
YHL034C
885 nt
8.88
□□□□□ -0.99
CUL3
P53202
RPC31
YNL151C
756 nt
8.88
□□□□□ -0.99
CUL3
P53202
GAS1
YMR307W
1680 nt
8.88
□□□□□ -0.99
CUL3
P53202
PTC6
YCR079W
1329 nt
8.87
□□□□□ -0.99
CUL3
P53202
YDR510C-A
YDR510C-A
117 nt
8.87
□□□□□ -0.99
CUL3
P53202
RSM7
YJR113C
744 nt
8.87
□□□□□ -0.99
CUL3
P53202
ODC1
YPL134C
933 nt
8.86
□□□□□ -0.99
CUL3
P53202
YGL114W
YGL114W
2178 nt
8.85
□□□□□ -0.99
CUL3
P53202
BUD20
YLR074C
501 nt
8.84
□□□□□ -0.99
CUL3
P53202
YJL160C
YJL160C
864 nt
8.83
□□□□□ -1
CUL3
P53202
YMR166C
YMR166C
1107 nt
8.81
□□□□□ -1
CUL3
P53202
EMC3
YKL207W
762 nt
8.8
□□□□□ -1
CUL3
P53202
DPL1
YDR294C
1770 nt
8.79
□□□□□ -1
CUL3
P53202
MAS1
YLR163C
1389 nt
8.79
□□□□□ -1
CUL3
P53202
PAU21
YOR394W
495 nt
8.79
□□□□□ -1
CUL3
P53202
LSP1
YPL004C
1026 nt
8.79
□□□□□ -1
CUL3
P53202
PAU22
YPL282C
495 nt
8.79
□□□□□ -1
CUL3
P53202
HMG2
YLR450W
3138 nt
8.78
□□□□□ -1
CUL3
P53202
GRH1
YDR517W
1119 nt
8.78
□□□□□ -1
CUL3
P53202
TPO4
YOR273C
1980 nt
8.78
□□□□□ -1
CUL3
P53202
YMR210W
YMR210W
1350 nt
8.77
□□□□□ -1.01
CUL3
P53202
GGA2
YHR108W
1758 nt
8.76
□□□□□ -1.01
CUL3
P53202
MDM35
YKL053C-A
261 nt
8.76
□□□□□ -1.01
CUL3
P53202
YOR343C
YOR343C
327 nt
8.76
□□□□□ -1.01
CUL3
P53202
PET18
YCR020C
648 nt
8.75
□□□□□ -1.01
CUL3
P53202
YLR460C
YLR460C
1131 nt
8.75
□□□□□ -1.01
CUL3
P53202
YMR316C-B
YMR316C-B
309 nt
8.75
□□□□□ -1.01
CUL3
P53202
HRA1
HRA1
564 nt
8.74
□□□□□ -1.01
CUL3
P53202
THI3
YDL080C
1830 nt
8.74
□□□□□ -1.01
CUL3
P53202
MCM5
YLR274W
2328 nt
8.73
□□□□□ -1.01
CUL3
P53202
GPM1
YKL152C
744 nt
8.73
□□□□□ -1.01
CUL3
P53202
YDR467C
YDR467C
327 nt
8.72
□□□□□ -1.01
CUL3
P53202
CAK1
YFL029C
1107 nt
8.72
□□□□□ -1.01
CUL3
P53202
ESBP6
YNL125C
2022 nt
8.71
□□□□□ -1.01
CUL3
P53202
CHS7
YHR142W
951 nt
8.71
□□□□□ -1.02
CUL3
P53202
RRT14
YIL127C
621 nt
8.71
□□□□□ -1.02
CUL3
P53202
OCH1
YGL038C
1443 nt
8.71
□□□□□ -1.02
CUL3
P53202
MET22
YOL064C
1074 nt
8.69
□□□□□ -1.02
CUL3
P53202
LEU4
YNL104C
1860 nt
8.68
□□□□□ -1.02
CUL3
P53202
MRP1
YDR347W
966 nt
8.68
□□□□□ -1.02
CUL3
P53202
RPL12B
YDR418W
498 nt
8.68
□□□□□ -1.02
CUL3
P53202
YAL016C-A
YAL016C-A
315 nt
8.67
□□□□□ -1.02
CUL3
P53202
MFT1
YML062C
1179 nt
8.67
□□□□□ -1.02
CUL3
P53202
YMR209C
YMR209C
1374 nt
8.66
□□□□□ -1.02
CUL3
P53202
UTR5
YEL035C
501 nt
8.66
□□□□□ -1.02
CUL3
P53202
YER156C
YER156C
1017 nt
8.66
□□□□□ -1.02
CUL3
P53202
OLA1
YBR025C
1185 nt
8.66
□□□□□ -1.02
CUL3
P53202
HEM14
YER014W
1620 nt
8.65
□□□□□ -1.02
CUL3
P53202
ADA2
YDR448W
1305 nt
8.65
□□□□□ -1.02
CUL3
P53202
tE(CUC)D
tE(CUC)D
72 nt
8.65
□□□□□ -1.02
CUL3
P53202
tE(CUC)I
tE(CUC)I
72 nt
8.65
□□□□□ -1.02
CUL3
P53202
DMA2
YNL116W
1569 nt
8.65
□□□□□ -1.03
CUL3
P53202
YIR035C
YIR035C
765 nt
8.64
□□□□□ -1.03
CUL3
P53202
RNA170
RNA170
169 nt
8.64
□□□□□ -1.03
CUL3
P53202
GDH1
YOR375C
1365 nt
8.63
□□□□□ -1.03
CUL3
P53202
PDC6
YGR087C
1692 nt
8.63
□□□□□ -1.03
CUL3
P53202
YBL095W
YBL095W
813 nt
8.63
□□□□□ -1.03
CUL3
P53202
AAC3
YBR085W
924 nt
8.63
□□□□□ -1.03
CUL3
P53202
TMS1
YDR105C
1422 nt
8.63
□□□□□ -1.03
CUL3
P53202
RFC1
YOR217W
2586 nt
8.62
□□□□□ -1.03
CUL3
P53202
INH1
YDL181W
258 nt
8.62
□□□□□ -1.03
CUL3
P53202
RPS6A
YPL090C
711 nt
8.62
□□□□□ -1.03
CUL3
P53202
RPS6B
YBR181C
711 nt
8.62
□□□□□ -1.03
CUL3
P53202
URA8
YJR103W
1737 nt
8.62
□□□□□ -1.03
CUL3
P53202
BXI1
YNL305C
894 nt
8.61
□□□□□ -1.03
CUL3
P53202
YPR084W
YPR084W
1371 nt
8.61
□□□□□ -1.03
CUL3
P53202
YJR149W
YJR149W
1215 nt
8.6
□□□□□ -1.03
CUL3
P53202
YMC2
YBR104W
990 nt
8.6
□□□□□ -1.03
CUL3
P53202
YRF1-2
YER190W
5046 nt
8.6
□□□□□ -1.03
CUL3
P53202
ILV2
YMR108W
2064 nt
8.6
□□□□□ -1.03
CUL3
P53202
tL(UAA)B1
tL(UAA)B1
84 nt
8.59
□□□□□ -1.03
CUL3
P53202
tL(UAA)B2
tL(UAA)B2
84 nt
8.59
□□□□□ -1.03
CUL3
P53202
tL(UAA)D
tL(UAA)D
84 nt
8.59
□□□□□ -1.03
CUL3
P53202
SUP51
tL(UAA)J
84 nt
8.59
□□□□□ -1.03
CUL3
P53202
tL(UAA)K
tL(UAA)K
84 nt
8.59
□□□□□ -1.03
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Retrieved 100 of 7,029 protein–RNA pairs in 47.1 ms