Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 RPC82YPR190C 1965 nt11.74□□□□□ -0.53
VMR1P38735 MRP1YDR347W 966 nt11.74□□□□□ -0.53
VMR1P38735 YJR149WYJR149W 1215 nt11.74□□□□□ -0.53
VMR1P38735 SUV3YPL029W 2214 nt11.74□□□□□ -0.53
VMR1P38735 INA1YLR413W 2028 nt11.73□□□□□ -0.53
VMR1P38735 RDN25-1RDN25-1 3396 nt11.72□□□□□ -0.53
VMR1P38735 RDN25-2RDN25-2 3396 nt11.72□□□□□ -0.53
VMR1P38735 LSR1LSR1 1175 nt11.71□□□□□ -0.53
VMR1P38735 LSP1YPL004C 1026 nt11.71□□□□□ -0.53
VMR1P38735 ENT4YLL038C 744 nt11.71□□□□□ -0.54
VMR1P38735 SRP54YPR088C 1626 nt11.7□□□□□ -0.54
VMR1P38735 DLD3YEL071W 1491 nt11.69□□□□□ -0.54
VMR1P38735 CRC1YOR100C 984 nt11.68□□□□□ -0.54
VMR1P38735 YMR166CYMR166C 1107 nt11.67□□□□□ -0.54
VMR1P38735 MCH5YOR306C 1566 nt11.66□□□□□ -0.54
VMR1P38735 KEL3YPL263C 1956 nt11.66□□□□□ -0.54
VMR1P38735 HAP5YOR358W 729 nt11.66□□□□□ -0.54
VMR1P38735 ILV3YJR016C 1758 nt11.63□□□□□ -0.55
VMR1P38735 YMR265CYMR265C 1386 nt11.63□□□□□ -0.55
VMR1P38735 VMA11YPL234C 495 nt11.62□□□□□ -0.55
VMR1P38735 ADE1YAR015W 921 nt11.6□□□□□ -0.55
VMR1P38735 SAN1YDR143C 1833 nt11.6□□□□□ -0.55
VMR1P38735 RIM2YBR192W 1134 nt11.58□□□□□ -0.55
VMR1P38735 GDH1YOR375C 1365 nt11.58□□□□□ -0.56
VMR1P38735 GID8YMR135C 1368 nt11.58□□□□□ -0.56
VMR1P38735 MRS6YOR370C 1812 nt11.57□□□□□ -0.56
VMR1P38735 RPS6AYPL090C 711 nt11.54□□□□□ -0.56
VMR1P38735 RPS6BYBR181C 711 nt11.54□□□□□ -0.56
VMR1P38735 PTC6YCR079W 1329 nt11.51□□□□□ -0.57
VMR1P38735 KGD2YDR148C 1392 nt11.51□□□□□ -0.57
VMR1P38735 snR31snR31 225 nt11.5□□□□□ -0.57
VMR1P38735 ARO8YGL202W 1503 nt11.5□□□□□ -0.57
VMR1P38735 YPT11YNL304W 1254 nt11.49□□□□□ -0.57
VMR1P38735 BXI1YNL305C 894 nt11.48□□□□□ -0.57
VMR1P38735 YHR219WYHR219W 1875 nt11.48□□□□□ -0.57
VMR1P38735 YKL133CYKL133C 1392 nt11.47□□□□□ -0.57
VMR1P38735 TAD2YJL035C 753 nt11.46□□□□□ -0.57
VMR1P38735 MFT1YML062C 1179 nt11.46□□□□□ -0.57
VMR1P38735 KES1YPL145C 1305 nt11.46□□□□□ -0.58
VMR1P38735 YER156CYER156C 1017 nt11.45□□□□□ -0.58
VMR1P38735 PET494YNR045W 1470 nt11.45□□□□□ -0.58
VMR1P38735 YFR020WYFR020W 699 nt11.45□□□□□ -0.58
VMR1P38735 FUS3YBL016W 1062 nt11.45□□□□□ -0.58
VMR1P38735 MUP1YGR055W 1725 nt11.44□□□□□ -0.58
VMR1P38735 YJL043WYJL043W 774 nt11.44□□□□□ -0.58
VMR1P38735 SNX3YOR357C 489 nt11.44□□□□□ -0.58
VMR1P38735 GAS1YMR307W 1680 nt11.41□□□□□ -0.58
VMR1P38735 RPN14YGL004C 1254 nt11.41□□□□□ -0.58
VMR1P38735 SPT20YOL148C 1815 nt11.4□□□□□ -0.58
VMR1P38735 CAK1YFL029C 1107 nt11.4□□□□□ -0.58
VMR1P38735 COQ8YGL119W 1506 nt11.4□□□□□ -0.58
VMR1P38735 RSM7YJR113C 744 nt11.39□□□□□ -0.59
VMR1P38735 OCH1YGL038C 1443 nt11.39□□□□□ -0.59
VMR1P38735 NUP53YMR153W 1428 nt11.39□□□□□ -0.59
VMR1P38735 YIL168WYIL168W 384 nt11.38□□□□□ -0.59
VMR1P38735 TDH1YJL052W 999 nt11.38□□□□□ -0.59
VMR1P38735 COS10YNR075W 1125 nt11.38□□□□□ -0.59
VMR1P38735 NCA3YJL116C 1014 nt11.37□□□□□ -0.59
VMR1P38735 SBP1YHL034C 885 nt11.33□□□□□ -0.6
VMR1P38735 MET22YOL064C 1074 nt11.33□□□□□ -0.6
VMR1P38735 YLR358CYLR358C 564 nt11.33□□□□□ -0.6
VMR1P38735 HAC1YFL031W 717 nt11.32□□□□□ -0.6
VMR1P38735 SHC1YER096W 1539 nt11.32□□□□□ -0.6
VMR1P38735 YPR084WYPR084W 1371 nt11.31□□□□□ -0.6
VMR1P38735 SGA1YIL099W 1650 nt11.29□□□□□ -0.6
VMR1P38735 RRT6YGL146C 936 nt11.27□□□□□ -0.61
VMR1P38735 CHS7YHR142W 951 nt11.27□□□□□ -0.61
VMR1P38735 HOL1YNR055C 1761 nt11.26□□□□□ -0.61
VMR1P38735 RRT14YIL127C 621 nt11.25□□□□□ -0.61
VMR1P38735 RPD3YNL330C 1302 nt11.24□□□□□ -0.61
VMR1P38735 YLR460CYLR460C 1131 nt11.24□□□□□ -0.61
VMR1P38735 RPR1RPR1 369 nt11.24□□□□□ -0.61
VMR1P38735 THI3YDL080C 1830 nt11.23□□□□□ -0.61
VMR1P38735 YBL095WYBL095W 813 nt11.22□□□□□ -0.61
VMR1P38735 ZAP1YJL056C 2643 nt11.22□□□□□ -0.61
VMR1P38735 RNA170RNA170 169 nt11.21□□□□□ -0.61
VMR1P38735 RHO1YPR165W 630 nt11.21□□□□□ -0.61
VMR1P38735 YMR316C-BYMR316C-B 309 nt11.2□□□□□ -0.62
VMR1P38735 UGP1YKL035W 1500 nt11.19□□□□□ -0.62
VMR1P38735 PDC6YGR087C 1692 nt11.19□□□□□ -0.62
VMR1P38735 RPC31YNL151C 756 nt11.17□□□□□ -0.62
VMR1P38735 UME6YDR207C 2511 nt11.16□□□□□ -0.62
VMR1P38735 APT1YML022W 564 nt11.15□□□□□ -0.62
VMR1P38735 CMP2YML057W 1815 nt11.14□□□□□ -0.63
VMR1P38735 SSL2YIL143C 2532 nt11.13□□□□□ -0.63
VMR1P38735 GGA2YHR108W 1758 nt11.12□□□□□ -0.63
VMR1P38735 SPG1YGR236C 288 nt11.11□□□□□ -0.63
VMR1P38735 YPT31YER031C 672 nt11.11□□□□□ -0.63
VMR1P38735 THI73YLR004C 1572 nt11.1□□□□□ -0.63
VMR1P38735 GPM1YKL152C 744 nt11.1□□□□□ -0.63
VMR1P38735 YML079WYML079W 606 nt11.09□□□□□ -0.63
VMR1P38735 SRY1YKL218C 981 nt11.08□□□□□ -0.64
VMR1P38735 ODC1YPL134C 933 nt11.08□□□□□ -0.64
VMR1P38735 YDR476CYDR476C 675 nt11.07□□□□□ -0.64
VMR1P38735 OLA1YBR025C 1185 nt11.07□□□□□ -0.64
VMR1P38735 PUP3YER094C 618 nt11.06□□□□□ -0.64
VMR1P38735 PUP2YGR253C 783 nt11.06□□□□□ -0.64
VMR1P38735 URA1YKL216W 945 nt11.06□□□□□ -0.64
VMR1P38735 DPL1YDR294C 1770 nt11.05□□□□□ -0.64
VMR1P38735 ATP2YJR121W 1536 nt11.05□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms