Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 CRC1YOR100C 984 nt8.73□□□□□ -1.01
SHE3P38272 MET2YNL277W 1461 nt8.72□□□□□ -1.01
SHE3P38272 MRS6YOR370C 1812 nt8.71□□□□□ -1.01
SHE3P38272 KRR1YCL059C 951 nt8.71□□□□□ -1.02
SHE3P38272 HIS2YFR025C 1008 nt8.71□□□□□ -1.02
SHE3P38272 FCY1YPR062W 477 nt8.71□□□□□ -1.02
SHE3P38272 TGA1tA(UGC)A 73 nt8.7□□□□□ -1.02
SHE3P38272 tA(UGC)EtA(UGC)E 73 nt8.7□□□□□ -1.02
SHE3P38272 tA(UGC)GtA(UGC)G 73 nt8.7□□□□□ -1.02
SHE3P38272 tA(UGC)LtA(UGC)L 73 nt8.7□□□□□ -1.02
SHE3P38272 tA(UGC)OtA(UGC)O 73 nt8.7□□□□□ -1.02
SHE3P38272 SFP1YLR403W 2052 nt8.68□□□□□ -1.02
SHE3P38272 RIM2YBR192W 1134 nt8.68□□□□□ -1.02
SHE3P38272 SAN1YDR143C 1833 nt8.68□□□□□ -1.02
SHE3P38272 YFR020WYFR020W 699 nt8.67□□□□□ -1.02
SHE3P38272 RSM7YJR113C 744 nt8.67□□□□□ -1.02
SHE3P38272 YPL108WYPL108W 507 nt8.66□□□□□ -1.02
SHE3P38272 BUD20YLR074C 501 nt8.65□□□□□ -1.02
SHE3P38272 YRF1-2YER190W 5046 nt8.65□□□□□ -1.03
SHE3P38272 ZAP1YJL056C 2643 nt8.65□□□□□ -1.03
SHE3P38272 SBP1YHL034C 885 nt8.64□□□□□ -1.03
SHE3P38272 CWP2YKL096W-A 279 nt8.64□□□□□ -1.03
SHE3P38272 KGD2YDR148C 1392 nt8.63□□□□□ -1.03
SHE3P38272 GAS1YMR307W 1680 nt8.63□□□□□ -1.03
SHE3P38272 NPP1YCR026C 2229 nt8.61□□□□□ -1.03
SHE3P38272 PTC6YCR079W 1329 nt8.61□□□□□ -1.03
SHE3P38272 UGP1YKL035W 1500 nt8.6□□□□□ -1.03
SHE3P38272 YLR460CYLR460C 1131 nt8.59□□□□□ -1.03
SHE3P38272 RPC31YNL151C 756 nt8.59□□□□□ -1.03
SHE3P38272 YMR166CYMR166C 1107 nt8.58□□□□□ -1.04
SHE3P38272 BSP1YPR171W 1731 nt8.57□□□□□ -1.04
SHE3P38272 GRH1YDR517W 1119 nt8.57□□□□□ -1.04
SHE3P38272 HRA1HRA1 564 nt8.57□□□□□ -1.04
SHE3P38272 YOR343CYOR343C 327 nt8.57□□□□□ -1.04
SHE3P38272 SSL2YIL143C 2532 nt8.56□□□□□ -1.04
SHE3P38272 YJL160CYJL160C 864 nt8.56□□□□□ -1.04
SHE3P38272 PAU21YOR394W 495 nt8.56□□□□□ -1.04
SHE3P38272 LSP1YPL004C 1026 nt8.56□□□□□ -1.04
SHE3P38272 PAU22YPL282C 495 nt8.56□□□□□ -1.04
SHE3P38272 EMC3YKL207W 762 nt8.55□□□□□ -1.04
SHE3P38272 YMR210WYMR210W 1350 nt8.53□□□□□ -1.04
SHE3P38272 RPL12BYDR418W 498 nt8.52□□□□□ -1.05
SHE3P38272 CHS7YHR142W 951 nt8.52□□□□□ -1.05
SHE3P38272 RRT14YIL127C 621 nt8.52□□□□□ -1.05
SHE3P38272 ODC1YPL134C 933 nt8.52□□□□□ -1.05
SHE3P38272 GGA2YHR108W 1758 nt8.51□□□□□ -1.05
SHE3P38272 MRP1YDR347W 966 nt8.5□□□□□ -1.05
SHE3P38272 YAL016C-AYAL016C-A 315 nt8.5□□□□□ -1.05
SHE3P38272 MAE1YKL029C 2010 nt8.49□□□□□ -1.05
SHE3P38272 HMG2YLR450W 3138 nt8.49□□□□□ -1.05
SHE3P38272 MFT1YML062C 1179 nt8.49□□□□□ -1.05
SHE3P38272 OLA1YBR025C 1185 nt8.49□□□□□ -1.05
SHE3P38272 YRF1-3YGR296W 5580 nt8.48□□□□□ -1.05
SHE3P38272 YRF1-6YNL339C 5580 nt8.48□□□□□ -1.05
SHE3P38272 YRF1-7YPL283C 5580 nt8.48□□□□□ -1.05
SHE3P38272 CAK1YFL029C 1107 nt8.48□□□□□ -1.05
SHE3P38272 DPL1YDR294C 1770 nt8.48□□□□□ -1.05
SHE3P38272 ESBP6YNL125C 2022 nt8.47□□□□□ -1.05
SHE3P38272 MDM35YKL053C-A 261 nt8.47□□□□□ -1.05
SHE3P38272 OCH1YGL038C 1443 nt8.46□□□□□ -1.05
SHE3P38272 YIR035CYIR035C 765 nt8.46□□□□□ -1.06
SHE3P38272 YMR316C-BYMR316C-B 309 nt8.46□□□□□ -1.06
SHE3P38272 GPM1YKL152C 744 nt8.45□□□□□ -1.06
SHE3P38272 MET22YOL064C 1074 nt8.45□□□□□ -1.06
SHE3P38272 YDR467CYDR467C 327 nt8.44□□□□□ -1.06
SHE3P38272 GDH1YOR375C 1365 nt8.44□□□□□ -1.06
SHE3P38272 YPR084WYPR084W 1371 nt8.44□□□□□ -1.06
SHE3P38272 THI3YDL080C 1830 nt8.43□□□□□ -1.06
SHE3P38272 TPO4YOR273C 1980 nt8.43□□□□□ -1.06
SHE3P38272 PET18YCR020C 648 nt8.43□□□□□ -1.06
SHE3P38272 YER156CYER156C 1017 nt8.42□□□□□ -1.06
SHE3P38272 RIM8YGL045W 1629 nt8.42□□□□□ -1.06
SHE3P38272 ADA2YDR448W 1305 nt8.41□□□□□ -1.06
SHE3P38272 PDC6YGR087C 1692 nt8.4□□□□□ -1.06
SHE3P38272 INH1YDL181W 258 nt8.4□□□□□ -1.06
SHE3P38272 ILV2YMR108W 2064 nt8.4□□□□□ -1.06
SHE3P38272 YGL114WYGL114W 2178 nt8.39□□□□□ -1.07
SHE3P38272 YPT31YER031C 672 nt8.39□□□□□ -1.07
SHE3P38272 TAD2YJL035C 753 nt8.39□□□□□ -1.07
SHE3P38272 YMR206WYMR206W 942 nt8.39□□□□□ -1.07
SHE3P38272 LEU4YNL104C 1860 nt8.38□□□□□ -1.07
SHE3P38272 TMS1YDR105C 1422 nt8.38□□□□□ -1.07
SHE3P38272 YBL095WYBL095W 813 nt8.38□□□□□ -1.07
SHE3P38272 YIL177CYIL177C 5277 nt8.38□□□□□ -1.07
SHE3P38272 AAC3YBR085W 924 nt8.37□□□□□ -1.07
SHE3P38272 YOR268CYOR268C 399 nt8.36□□□□□ -1.07
SHE3P38272 YMC2YBR104W 990 nt8.36□□□□□ -1.07
SHE3P38272 DMA2YNL116W 1569 nt8.35□□□□□ -1.07
SHE3P38272 UTR5YEL035C 501 nt8.35□□□□□ -1.07
SHE3P38272 BUB2YMR055C 921 nt8.35□□□□□ -1.07
SHE3P38272 tE(CUC)DtE(CUC)D 72 nt8.34□□□□□ -1.07
SHE3P38272 tE(CUC)ItE(CUC)I 72 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)B1tL(UAA)B1 84 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)B2tL(UAA)B2 84 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)DtL(UAA)D 84 nt8.34□□□□□ -1.07
SHE3P38272 SUP51tL(UAA)J 84 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)KtL(UAA)K 84 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)LtL(UAA)L 84 nt8.34□□□□□ -1.07
SHE3P38272 tL(UAA)NtL(UAA)N 84 nt8.34□□□□□ -1.07
SHE3P38272 YJR149WYJR149W 1215 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms