Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 YCR025CYCR025C 411 nt9.28□□□□□ -0.92
VPS35P34110 IPL1YPL209C 1104 nt9.28□□□□□ -0.92
VPS35P34110 NAS2YIL007C 663 nt9.27□□□□□ -0.93
VPS35P34110 SRN2YLR119W 642 nt9.27□□□□□ -0.93
VPS35P34110 RFC1YOR217W 2586 nt9.27□□□□□ -0.93
VPS35P34110 DLD3YEL071W 1491 nt9.27□□□□□ -0.93
VPS35P34110 tA(AGC)DtA(AGC)D 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)FtA(AGC)F 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)GtA(AGC)G 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)HtA(AGC)H 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)JtA(AGC)J 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)K1tA(AGC)K1 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)K2tA(AGC)K2 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)LtA(AGC)L 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)M1tA(AGC)M1 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)M2tA(AGC)M2 73 nt9.26□□□□□ -0.93
VPS35P34110 tA(AGC)PtA(AGC)P 73 nt9.26□□□□□ -0.93
VPS35P34110 YNL165WYNL165W 1221 nt9.26□□□□□ -0.93
VPS35P34110 LSR1LSR1 1175 nt9.26□□□□□ -0.93
VPS35P34110 snR31snR31 225 nt9.26□□□□□ -0.93
VPS35P34110 ELO1YJL196C 933 nt9.25□□□□□ -0.93
VPS35P34110 RPN14YGL004C 1254 nt9.24□□□□□ -0.93
VPS35P34110 RMA1YKL132C 1293 nt9.24□□□□□ -0.93
VPS35P34110 ITR2YOL103W 1830 nt9.24□□□□□ -0.93
VPS35P34110 YIR018C-AYIR018C-A 138 nt9.23□□□□□ -0.93
VPS35P34110 VMA11YPL234C 495 nt9.22□□□□□ -0.93
VPS35P34110 YCP4YCR004C 744 nt9.21□□□□□ -0.94
VPS35P34110 FLX1YIL134W 936 nt9.21□□□□□ -0.94
VPS35P34110 CDD1YLR245C 429 nt9.21□□□□□ -0.94
VPS35P34110 DMA2YNL116W 1569 nt9.2□□□□□ -0.94
VPS35P34110 MOB1YIL106W 945 nt9.2□□□□□ -0.94
VPS35P34110 YKR012CYKR012C 378 nt9.2□□□□□ -0.94
VPS35P34110 SWP1YMR149W 861 nt9.2□□□□□ -0.94
VPS35P34110 NAM8YHR086W 1572 nt9.2□□□□□ -0.94
VPS35P34110 GAL2YLR081W 1725 nt9.19□□□□□ -0.94
VPS35P34110 CYC3YAL039C 810 nt9.19□□□□□ -0.94
VPS35P34110 SWT21YNL187W 1074 nt9.19□□□□□ -0.94
VPS35P34110 HAP5YOR358W 729 nt9.19□□□□□ -0.94
VPS35P34110 YMR265CYMR265C 1386 nt9.19□□□□□ -0.94
VPS35P34110 HXK1YFR053C 1458 nt9.19□□□□□ -0.94
VPS35P34110 DTR1YBR180W 1719 nt9.19□□□□□ -0.94
VPS35P34110 ADH3YMR083W 1128 nt9.18□□□□□ -0.94
VPS35P34110 IDP3YNL009W 1263 nt9.18□□□□□ -0.94
VPS35P34110 PSD1YNL169C 1503 nt9.18□□□□□ -0.94
VPS35P34110 ATG22YCL038C 1587 nt9.18□□□□□ -0.94
VPS35P34110 RPD3YNL330C 1302 nt9.17□□□□□ -0.94
VPS35P34110 PHB2YGR231C 933 nt9.17□□□□□ -0.94
VPS35P34110 YPL071CYPL071C 471 nt9.17□□□□□ -0.94
VPS35P34110 ALD5YER073W 1563 nt9.16□□□□□ -0.94
VPS35P34110 TOK1YJL093C 2076 nt9.16□□□□□ -0.94
VPS35P34110 YIA6YIL006W 1122 nt9.16□□□□□ -0.94
VPS35P34110 SAM50YNL026W 1455 nt9.15□□□□□ -0.94
VPS35P34110 RIB1YBL033C 1038 nt9.15□□□□□ -0.94
VPS35P34110 YHR218WYHR218W 1812 nt9.15□□□□□ -0.95
VPS35P34110 BMT5YIL096C 1011 nt9.14□□□□□ -0.95
VPS35P34110 SNX3YOR357C 489 nt9.14□□□□□ -0.95
VPS35P34110 SUV3YPL029W 2214 nt9.14□□□□□ -0.95
VPS35P34110 MET1YKR069W 1782 nt9.14□□□□□ -0.95
VPS35P34110 ENO1YGR254W 1314 nt9.13□□□□□ -0.95
VPS35P34110 CWP2YKL096W-A 279 nt9.13□□□□□ -0.95
VPS35P34110 REX2YLR059C 810 nt9.13□□□□□ -0.95
VPS35P34110 SFL1YOR140W 2301 nt9.13□□□□□ -0.95
VPS35P34110 KRR1YCL059C 951 nt9.12□□□□□ -0.95
VPS35P34110 SDS24YBR214W 1584 nt9.12□□□□□ -0.95
VPS35P34110 YJL211CYJL211C 444 nt9.11□□□□□ -0.95
VPS35P34110 MDM35YKL053C-A 261 nt9.11□□□□□ -0.95
VPS35P34110 SRP54YPR088C 1626 nt9.11□□□□□ -0.95
VPS35P34110 EEB1YPL095C 1371 nt9.11□□□□□ -0.95
VPS35P34110 SOD2YHR008C 702 nt9.1□□□□□ -0.95
VPS35P34110 CRC1YOR100C 984 nt9.1□□□□□ -0.95
VPS35P34110 HXT10YFL011W 1641 nt9.09□□□□□ -0.95
VPS35P34110 SER2YGR208W 930 nt9.09□□□□□ -0.95
VPS35P34110 YKL053WYKL053W 375 nt9.09□□□□□ -0.95
VPS35P34110 LYS20YDL182W 1287 nt9.08□□□□□ -0.96
VPS35P34110 YPT11YNL304W 1254 nt9.08□□□□□ -0.96
VPS35P34110 HTS1YPR033C 1641 nt9.08□□□□□ -0.96
VPS35P34110 MTO1YGL236C 2010 nt9.07□□□□□ -0.96
VPS35P34110 SRP102YKL154W 735 nt9.07□□□□□ -0.96
VPS35P34110 YMR007WYMR007W 381 nt9.06□□□□□ -0.96
VPS35P34110 RCR1YBR005W 642 nt9.06□□□□□ -0.96
VPS35P34110 VBA3YCL069W 1377 nt9.06□□□□□ -0.96
VPS35P34110 YRF1-2YER190W 5046 nt9.05□□□□□ -0.96
VPS35P34110 DPL1YDR294C 1770 nt9.04□□□□□ -0.96
VPS35P34110 MLS1YNL117W 1665 nt9.04□□□□□ -0.96
VPS35P34110 YLR280CYLR280C 351 nt9.04□□□□□ -0.96
VPS35P34110 CYT1YOR065W 930 nt9.04□□□□□ -0.96
VPS35P34110 UTP6YDR449C 1323 nt9.04□□□□□ -0.96
VPS35P34110 SWM1YDR260C 513 nt9.03□□□□□ -0.96
VPS35P34110 ERG6YML008C 1152 nt9.02□□□□□ -0.97
VPS35P34110 RPC31YNL151C 756 nt9.02□□□□□ -0.97
VPS35P34110 SAN1YDR143C 1833 nt9.02□□□□□ -0.97
VPS35P34110 ERO1YML130C 1692 nt9.01□□□□□ -0.97
VPS35P34110 RIM2YBR192W 1134 nt9.01□□□□□ -0.97
VPS35P34110 KGD2YDR148C 1392 nt9□□□□□ -0.97
VPS35P34110 SBP1YHL034C 885 nt9□□□□□ -0.97
VPS35P34110 RSM7YJR113C 744 nt9□□□□□ -0.97
VPS35P34110 YGR210CYGR210C 1236 nt8.99□□□□□ -0.97
VPS35P34110 AGP3YFL055W 1677 nt8.97□□□□□ -0.97
VPS35P34110 GAS1YMR307W 1680 nt8.97□□□□□ -0.97
VPS35P34110 YFR020WYFR020W 699 nt8.97□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms