Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
GDF1P27539 AC127502.1-201ENST00000399971 1502 ntBASIC23.6■■□□□ 1.37
GDF1P27539 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.6■■□□□ 1.37
GDF1P27539 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
GDF1P27539 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
GDF1P27539 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.59■■□□□ 1.37
GDF1P27539 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
GDF1P27539 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.58■■□□□ 1.37
GDF1P27539 LINC00273-201ENST00000539813 1452 ntBASIC23.57■■□□□ 1.36
GDF1P27539 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.57■■□□□ 1.36
GDF1P27539 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.57■■□□□ 1.36
GDF1P27539 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.57■■□□□ 1.36
GDF1P27539 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
GDF1P27539 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
GDF1P27539 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
GDF1P27539 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GDF1P27539 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.55■■□□□ 1.36
GDF1P27539 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.55■■□□□ 1.36
GDF1P27539 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.55■■□□□ 1.36
GDF1P27539 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
GDF1P27539 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.55■■□□□ 1.36
GDF1P27539 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.55■■□□□ 1.36
GDF1P27539 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
GDF1P27539 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
GDF1P27539 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
GDF1P27539 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
GDF1P27539 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.54■■□□□ 1.36
GDF1P27539 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.54■■□□□ 1.36
GDF1P27539 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
GDF1P27539 ST7-AS1-201ENST00000456775 1889 ntBASIC23.53■■□□□ 1.36
GDF1P27539 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.53■■□□□ 1.36
GDF1P27539 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
GDF1P27539 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.53■■□□□ 1.36
GDF1P27539 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.53■■□□□ 1.36
GDF1P27539 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
GDF1P27539 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
GDF1P27539 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
GDF1P27539 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
GDF1P27539 MIR3648-2-201ENST00000581792 180 ntBASIC23.52■■□□□ 1.36
GDF1P27539 MIR3648-1-201ENST00000615959 180 ntBASIC23.52■■□□□ 1.36
GDF1P27539 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GDF1P27539 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
GDF1P27539 AC016575.1-201ENST00000607026 382 ntBASIC23.51■■□□□ 1.35
GDF1P27539 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GDF1P27539 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
GDF1P27539 CR559946.2-201ENST00000623684 991 ntBASIC23.5■■□□□ 1.35
GDF1P27539 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L13-201ENST00000554103 1267 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L15-201ENST00000611059 1267 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L23-201ENST00000615195 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L24-201ENST00000617576 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L22-201ENST00000618238 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L20-201ENST00000619712 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L21-201ENST00000622058 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L10-201ENST00000622460 1267 ntBASIC23.49■■□□□ 1.35
GDF1P27539 DUX4L25-201ENST00000624915 1269 ntBASIC23.49■■□□□ 1.35
GDF1P27539 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.49■■□□□ 1.35
GDF1P27539 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
GDF1P27539 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
GDF1P27539 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
GDF1P27539 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.48■■□□□ 1.35
GDF1P27539 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.48■■□□□ 1.35
GDF1P27539 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
GDF1P27539 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
GDF1P27539 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
GDF1P27539 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
GDF1P27539 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GDF1P27539 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.46■■□□□ 1.35
GDF1P27539 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
GDF1P27539 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
GDF1P27539 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
GDF1P27539 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
GDF1P27539 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
GDF1P27539 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
GDF1P27539 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.45■■□□□ 1.34
GDF1P27539 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.45■■□□□ 1.34
GDF1P27539 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
GDF1P27539 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
GDF1P27539 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
GDF1P27539 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
GDF1P27539 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
GDF1P27539 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.44■■□□□ 1.34
GDF1P27539 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
GDF1P27539 MIR639-201ENST00000384974 98 ntBASIC23.43■■□□□ 1.34
GDF1P27539 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.43■■□□□ 1.34
GDF1P27539 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
GDF1P27539 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.42■■□□□ 1.34
GDF1P27539 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.42■■□□□ 1.34
GDF1P27539 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
GDF1P27539 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
GDF1P27539 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
GDF1P27539 AC135983.2-203ENST00000454486 1613 ntBASIC23.41■■□□□ 1.34
GDF1P27539 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
GDF1P27539 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
GDF1P27539 WHAMMP2-203ENST00000563942 1603 ntBASIC23.41■■□□□ 1.34
GDF1P27539 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.4■■□□□ 1.34
GDF1P27539 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
GDF1P27539 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
GDF1P27539 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
GDF1P27539 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms