Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 KEL3YPL263C 1956 nt8.97□□□□□ -0.97
MSH1P25846 PFS2YNL317W 1398 nt8.97□□□□□ -0.97
MSH1P25846 ESS1YJR017C 513 nt8.96□□□□□ -0.98
MSH1P25846 THI3YDL080C 1830 nt8.96□□□□□ -0.98
MSH1P25846 RIB7YBR153W 735 nt8.95□□□□□ -0.98
MSH1P25846 YMR210WYMR210W 1350 nt8.95□□□□□ -0.98
MSH1P25846 YLR072WYLR072W 2082 nt8.94□□□□□ -0.98
MSH1P25846 ADE8YDR408C 645 nt8.94□□□□□ -0.98
MSH1P25846 IMO32YGR031W 1029 nt8.94□□□□□ -0.98
MSH1P25846 YJR114WYJR114W 393 nt8.94□□□□□ -0.98
MSH1P25846 RRT8YOL048C 1029 nt8.94□□□□□ -0.98
MSH1P25846 OPI3YJR073C 621 nt8.93□□□□□ -0.98
MSH1P25846 YRF1-2YER190W 5046 nt8.93□□□□□ -0.98
MSH1P25846 MET1YKR069W 1782 nt8.92□□□□□ -0.98
MSH1P25846 TPN1YGL186C 1740 nt8.92□□□□□ -0.98
MSH1P25846 KGD2YDR148C 1392 nt8.92□□□□□ -0.98
MSH1P25846 TOK1YJL093C 2076 nt8.92□□□□□ -0.98
MSH1P25846 MET30YIL046W 1923 nt8.91□□□□□ -0.98
MSH1P25846 RSC4YKR008W 1878 nt8.9□□□□□ -0.98
MSH1P25846 YFR036W-AYFR036W-A 651 nt8.89□□□□□ -0.99
MSH1P25846 MDH2YOL126C 1134 nt8.89□□□□□ -0.99
MSH1P25846 YDR306CYDR306C 1437 nt8.88□□□□□ -0.99
MSH1P25846 LEA1YPL213W 717 nt8.88□□□□□ -0.99
MSH1P25846 CCT5YJR064W 1689 nt8.88□□□□□ -0.99
MSH1P25846 YKL053WYKL053W 375 nt8.87□□□□□ -0.99
MSH1P25846 YNL190WYNL190W 615 nt8.87□□□□□ -0.99
MSH1P25846 ABP1YCR088W 1779 nt8.86□□□□□ -0.99
MSH1P25846 GAL3YDR009W 1563 nt8.86□□□□□ -0.99
MSH1P25846 DIA4YHR011W 1341 nt8.85□□□□□ -0.99
MSH1P25846 CHA1YCL064C 1083 nt8.85□□□□□ -0.99
MSH1P25846 tS(GCU)LtS(GCU)L 80 nt8.85□□□□□ -0.99
MSH1P25846 GGA2YHR108W 1758 nt8.84□□□□□ -0.99
MSH1P25846 MRS4YKR052C 915 nt8.84□□□□□ -0.99
MSH1P25846 TAF13YML098W 504 nt8.84□□□□□ -0.99
MSH1P25846 AIM34YMR003W 597 nt8.84□□□□□ -0.99
MSH1P25846 SWT21YNL187W 1074 nt8.84□□□□□ -0.99
MSH1P25846 snR86snR86 1004 nt8.83□□□□□ -1
MSH1P25846 ALR1YOL130W 2580 nt8.83□□□□□ -1
MSH1P25846 LAS17YOR181W 1902 nt8.82□□□□□ -1
MSH1P25846 snR31snR31 225 nt8.82□□□□□ -1
MSH1P25846 YMR316C-BYMR316C-B 309 nt8.81□□□□□ -1
MSH1P25846 PMT7YDR307W 1989 nt8.8□□□□□ -1
MSH1P25846 SLM3YDL033C 1254 nt8.79□□□□□ -1
MSH1P25846 PRC1YMR297W 1599 nt8.77□□□□□ -1.01
MSH1P25846 YPL264CYPL264C 1062 nt8.75□□□□□ -1.01
MSH1P25846 TVP23YDR084C 600 nt8.74□□□□□ -1.01
MSH1P25846 SBP1YHL034C 885 nt8.73□□□□□ -1.01
MSH1P25846 TOM71YHR117W 1920 nt8.73□□□□□ -1.01
MSH1P25846 PUS7YOR243C 2031 nt8.72□□□□□ -1.01
MSH1P25846 LYS20YDL182W 1287 nt8.72□□□□□ -1.01
MSH1P25846 STP3YLR375W 1032 nt8.72□□□□□ -1.01
MSH1P25846 MHF1YOL086W-A 273 nt8.72□□□□□ -1.01
MSH1P25846 HIS3YOR202W 663 nt8.72□□□□□ -1.01
MSH1P25846 IML3YBR107C 738 nt8.72□□□□□ -1.01
MSH1P25846 SAN1YDR143C 1833 nt8.72□□□□□ -1.01
MSH1P25846 ITR1YDR497C 1755 nt8.71□□□□□ -1.01
MSH1P25846 PAB1YER165W 1734 nt8.71□□□□□ -1.02
MSH1P25846 PAU5YFL020C 369 nt8.7□□□□□ -1.02
MSH1P25846 SPE4YLR146C 903 nt8.7□□□□□ -1.02
MSH1P25846 POT1YIL160C 1254 nt8.69□□□□□ -1.02
MSH1P25846 YPR126CYPR126C 309 nt8.69□□□□□ -1.02
MSH1P25846 NAP1YKR048C 1254 nt8.68□□□□□ -1.02
MSH1P25846 AAC3YBR085W 924 nt8.68□□□□□ -1.02
MSH1P25846 MEP1YGR121C 1479 nt8.68□□□□□ -1.02
MSH1P25846 ENO2YHR174W 1314 nt8.67□□□□□ -1.02
MSH1P25846 ERG6YML008C 1152 nt8.67□□□□□ -1.02
MSH1P25846 GSF2YML048W 1212 nt8.67□□□□□ -1.02
MSH1P25846 NDE2YDL085W 1638 nt8.66□□□□□ -1.02
MSH1P25846 SEN2YLR105C 1134 nt8.66□□□□□ -1.02
MSH1P25846 SNZ1YMR096W 894 nt8.66□□□□□ -1.02
MSH1P25846 PGC1YPL206C 966 nt8.66□□□□□ -1.02
MSH1P25846 AMF1YOR378W 1548 nt8.65□□□□□ -1.02
MSH1P25846 CTI6YPL181W 1521 nt8.65□□□□□ -1.02
MSH1P25846 WSC4YHL028W 1818 nt8.64□□□□□ -1.03
MSH1P25846 YBR232CYBR232C 360 nt8.64□□□□□ -1.03
MSH1P25846 BEM1YBR200W 1656 nt8.64□□□□□ -1.03
MSH1P25846 TOP3YLR234W 1971 nt8.64□□□□□ -1.03
MSH1P25846 YER152CYER152C 1332 nt8.63□□□□□ -1.03
MSH1P25846 SPS100YHR139C 981 nt8.63□□□□□ -1.03
MSH1P25846 YJL009WYJL009W 327 nt8.63□□□□□ -1.03
MSH1P25846 ATP10YLR393W 840 nt8.63□□□□□ -1.03
MSH1P25846 YMR253CYMR253C 1245 nt8.62□□□□□ -1.03
MSH1P25846 HXT9YJL219W 1704 nt8.61□□□□□ -1.03
MSH1P25846 PAR32YDL173W 888 nt8.61□□□□□ -1.03
MSH1P25846 MRN1YPL184C 1839 nt8.61□□□□□ -1.03
MSH1P25846 ABZ2YMR289W 1125 nt8.6□□□□□ -1.03
MSH1P25846 MET13YGL125W 1803 nt8.59□□□□□ -1.03
MSH1P25846 FRT1YOR324C 1809 nt8.59□□□□□ -1.03
MSH1P25846 PTC6YCR079W 1329 nt8.59□□□□□ -1.03
MSH1P25846 INO1YJL153C 1602 nt8.59□□□□□ -1.03
MSH1P25846 TPC1YGR096W 945 nt8.59□□□□□ -1.03
MSH1P25846 GAS1YMR307W 1680 nt8.59□□□□□ -1.03
MSH1P25846 SRP54YPR088C 1626 nt8.58□□□□□ -1.04
MSH1P25846 TUB4YLR212C 1422 nt8.58□□□□□ -1.04
MSH1P25846 GGC1YDL198C 903 nt8.58□□□□□ -1.04
MSH1P25846 YEL034C-AYEL034C-A 603 nt8.58□□□□□ -1.04
MSH1P25846 NAS6YGR232W 687 nt8.58□□□□□ -1.04
MSH1P25846 PMA2YPL036W 2844 nt8.58□□□□□ -1.04
MSH1P25846 GNP1YDR508C 1992 nt8.57□□□□□ -1.04
MSH1P25846 YNL140CYNL140C 570 nt8.56□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms