Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP1R3DO95685 AC136428.2-201ENST00000563187 214 ntBASIC23.37■■□□□ 1.33
PPP1R3DO95685 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
PPP1R3DO95685 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.37■■□□□ 1.33
PPP1R3DO95685 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP1R3DO95685 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP1R3DO95685 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP1R3DO95685 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP1R3DO95685 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP1R3DO95685 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP1R3DO95685 AC097358.2-201ENST00000607541 1159 ntBASIC23.35■■□□□ 1.33
PPP1R3DO95685 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP1R3DO95685 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP1R3DO95685 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PPP1R3DO95685 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.34■■□□□ 1.33
PPP1R3DO95685 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP1R3DO95685 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP1R3DO95685 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.32■■□□□ 1.32
PPP1R3DO95685 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.32■■□□□ 1.32
PPP1R3DO95685 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.31■■□□□ 1.32
PPP1R3DO95685 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.31■■□□□ 1.32
PPP1R3DO95685 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.31■■□□□ 1.32
PPP1R3DO95685 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PPP1R3DO95685 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PPP1R3DO95685 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP1R3DO95685 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
PPP1R3DO95685 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.29■■□□□ 1.32
PPP1R3DO95685 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP1R3DO95685 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP1R3DO95685 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PPP1R3DO95685 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PPP1R3DO95685 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PPP1R3DO95685 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.27■■□□□ 1.32
PPP1R3DO95685 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP1R3DO95685 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PPP1R3DO95685 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPP1R3DO95685 AC127502.1-201ENST00000399971 1502 ntBASIC23.27■■□□□ 1.32
PPP1R3DO95685 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP1R3DO95685 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP1R3DO95685 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP1R3DO95685 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP1R3DO95685 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP1R3DO95685 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP1R3DO95685 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP1R3DO95685 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP1R3DO95685 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
PPP1R3DO95685 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.23■■□□□ 1.31
PPP1R3DO95685 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP1R3DO95685 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP1R3DO95685 AP004833.2-201ENST00000532228 1454 ntBASIC23.23■■□□□ 1.31
PPP1R3DO95685 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP1R3DO95685 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP1R3DO95685 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.21■■□□□ 1.31
PPP1R3DO95685 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.21■■□□□ 1.31
PPP1R3DO95685 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PPP1R3DO95685 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP1R3DO95685 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.2■■□□□ 1.3
PPP1R3DO95685 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP1R3DO95685 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PPP1R3DO95685 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PPP1R3DO95685 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PPP1R3DO95685 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP1R3DO95685 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP1R3DO95685 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP1R3DO95685 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.17■■□□□ 1.3
PPP1R3DO95685 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PPP1R3DO95685 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP1R3DO95685 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
PPP1R3DO95685 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.16■■□□□ 1.3
PPP1R3DO95685 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP1R3DO95685 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.16■■□□□ 1.3
PPP1R3DO95685 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP1R3DO95685 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP1R3DO95685 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP1R3DO95685 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.15■■□□□ 1.3
PPP1R3DO95685 MIR762-201ENST00000390236 83 ntBASIC23.15■■□□□ 1.3
PPP1R3DO95685 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PPP1R3DO95685 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP1R3DO95685 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.15■■□□□ 1.3
PPP1R3DO95685 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PPP1R3DO95685 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP1R3DO95685 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
PPP1R3DO95685 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PPP1R3DO95685 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PPP1R3DO95685 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PPP1R3DO95685 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.14■■□□□ 1.29
PPP1R3DO95685 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PPP1R3DO95685 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PPP1R3DO95685 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP1R3DO95685 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP1R3DO95685 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
PPP1R3DO95685 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP1R3DO95685 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP1R3DO95685 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP1R3DO95685 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms