Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.07■■□□□ 1.44
HCN1O60741 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCN1O60741 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.06■■□□□ 1.44
HCN1O60741 MIR7108-201ENST00000614319 87 ntBASIC24.06■■□□□ 1.44
HCN1O60741 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCN1O60741 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
HCN1O60741 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.03■■□□□ 1.44
HCN1O60741 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCN1O60741 DUX4L29-201ENST00000425409 679 ntBASIC24.03■■□□□ 1.44
HCN1O60741 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.03■■□□□ 1.44
HCN1O60741 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCN1O60741 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
HCN1O60741 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCN1O60741 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCN1O60741 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HCN1O60741 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.01■■□□□ 1.43
HCN1O60741 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCN1O60741 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.01■■□□□ 1.43
HCN1O60741 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.01■■□□□ 1.43
HCN1O60741 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24■■□□□ 1.43
HCN1O60741 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
HCN1O60741 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
HCN1O60741 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.99■■□□□ 1.43
HCN1O60741 ZNRF2P2-203ENST00000454624 420 ntBASIC23.99■■□□□ 1.43
HCN1O60741 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.99■■□□□ 1.43
HCN1O60741 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
HCN1O60741 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HCN1O60741 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.98■■□□□ 1.43
HCN1O60741 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.98■■□□□ 1.43
HCN1O60741 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
HCN1O60741 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.97■■□□□ 1.43
HCN1O60741 MIR6090-201ENST00000622481 60 ntBASIC23.97■■□□□ 1.43
HCN1O60741 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HCN1O60741 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HCN1O60741 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.96■■□□□ 1.43
HCN1O60741 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
HCN1O60741 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HCN1O60741 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HCN1O60741 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
HCN1O60741 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.94■■□□□ 1.42
HCN1O60741 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.94■■□□□ 1.42
HCN1O60741 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HCN1O60741 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HCN1O60741 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCN1O60741 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCN1O60741 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HCN1O60741 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HCN1O60741 AC021231.2-201ENST00000594613 730 ntBASIC23.93■■□□□ 1.42
HCN1O60741 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HCN1O60741 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HCN1O60741 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HCN1O60741 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HCN1O60741 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.91■■□□□ 1.42
HCN1O60741 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
HCN1O60741 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.9■■□□□ 1.42
HCN1O60741 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCN1O60741 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCN1O60741 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HCN1O60741 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
HCN1O60741 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HCN1O60741 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HCN1O60741 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HCN1O60741 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
HCN1O60741 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HCN1O60741 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCN1O60741 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCN1O60741 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCN1O60741 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCN1O60741 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.86■■□□□ 1.41
HCN1O60741 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.86■■□□□ 1.41
HCN1O60741 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCN1O60741 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HCN1O60741 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HCN1O60741 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.84■■□□□ 1.41
HCN1O60741 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HCN1O60741 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HCN1O60741 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
HCN1O60741 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HCN1O60741 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HCN1O60741 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HCN1O60741 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HCN1O60741 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCN1O60741 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
HCN1O60741 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HCN1O60741 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCN1O60741 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
HCN1O60741 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.81■■□□□ 1.4
HCN1O60741 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HCN1O60741 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HCN1O60741 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.8■■□□□ 1.4
HCN1O60741 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HCN1O60741 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HCN1O60741 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.79■■□□□ 1.4
HCN1O60741 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HCN1O60741 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
HCN1O60741 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
HCN1O60741 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HCN1O60741 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCN1O60741 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
HCN1O60741 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms