Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TSPAN3O60637 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
TSPAN3O60637 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TSPAN3O60637 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
TSPAN3O60637 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.82■■□□□ 1.88
TSPAN3O60637 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.82■■□□□ 1.88
TSPAN3O60637 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.82■■□□□ 1.88
TSPAN3O60637 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TSPAN3O60637 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
TSPAN3O60637 ST7-AS1-201ENST00000456775 1889 ntBASIC26.81■■□□□ 1.88
TSPAN3O60637 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.8■■□□□ 1.88
TSPAN3O60637 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.79■■□□□ 1.88
TSPAN3O60637 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.79■■□□□ 1.88
TSPAN3O60637 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TSPAN3O60637 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TSPAN3O60637 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
TSPAN3O60637 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.78■■□□□ 1.88
TSPAN3O60637 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.78■■□□□ 1.88
TSPAN3O60637 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.78■■□□□ 1.88
TSPAN3O60637 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TSPAN3O60637 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TSPAN3O60637 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TSPAN3O60637 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.77■■□□□ 1.88
TSPAN3O60637 LINC00273-201ENST00000539813 1452 ntBASIC26.77■■□□□ 1.88
TSPAN3O60637 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.77■■□□□ 1.88
TSPAN3O60637 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TSPAN3O60637 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.77■■□□□ 1.88
TSPAN3O60637 MIR3648-2-201ENST00000581792 180 ntBASIC26.76■■□□□ 1.87
TSPAN3O60637 AC016575.1-201ENST00000607026 382 ntBASIC26.76■■□□□ 1.87
TSPAN3O60637 MIR3648-1-201ENST00000615959 180 ntBASIC26.76■■□□□ 1.87
TSPAN3O60637 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TSPAN3O60637 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TSPAN3O60637 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.74■■□□□ 1.87
TSPAN3O60637 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.74■■□□□ 1.87
TSPAN3O60637 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TSPAN3O60637 CR559946.2-201ENST00000623684 991 ntBASIC26.74■■□□□ 1.87
TSPAN3O60637 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TSPAN3O60637 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TSPAN3O60637 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.73■■□□□ 1.87
TSPAN3O60637 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TSPAN3O60637 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.72■■□□□ 1.87
TSPAN3O60637 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TSPAN3O60637 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
TSPAN3O60637 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
TSPAN3O60637 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.71■■□□□ 1.87
TSPAN3O60637 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.71■■□□□ 1.87
TSPAN3O60637 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
TSPAN3O60637 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
TSPAN3O60637 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.7■■□□□ 1.87
TSPAN3O60637 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TSPAN3O60637 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.7■■□□□ 1.86
TSPAN3O60637 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.69■■□□□ 1.86
TSPAN3O60637 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.69■■□□□ 1.86
TSPAN3O60637 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TSPAN3O60637 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
TSPAN3O60637 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TSPAN3O60637 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L13-201ENST00000554103 1267 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L15-201ENST00000611059 1267 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L23-201ENST00000615195 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L24-201ENST00000617576 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L22-201ENST00000618238 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L20-201ENST00000619712 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L21-201ENST00000622058 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L10-201ENST00000622460 1267 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 DUX4L25-201ENST00000624915 1269 ntBASIC26.69■■□□□ 1.86
TSPAN3O60637 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TSPAN3O60637 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.68■■□□□ 1.86
TSPAN3O60637 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TSPAN3O60637 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TSPAN3O60637 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
TSPAN3O60637 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TSPAN3O60637 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.65■■□□□ 1.86
TSPAN3O60637 WHAMMP2-203ENST00000563942 1603 ntBASIC26.65■■□□□ 1.86
TSPAN3O60637 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TSPAN3O60637 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TSPAN3O60637 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
TSPAN3O60637 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
TSPAN3O60637 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TSPAN3O60637 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
TSPAN3O60637 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TSPAN3O60637 MIR639-201ENST00000384974 98 ntBASIC26.63■■□□□ 1.85
TSPAN3O60637 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TSPAN3O60637 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TSPAN3O60637 AC135983.2-203ENST00000454486 1613 ntBASIC26.62■■□□□ 1.85
TSPAN3O60637 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
TSPAN3O60637 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.62■■□□□ 1.85
TSPAN3O60637 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.62■■□□□ 1.85
TSPAN3O60637 ABCB10P1-201ENST00000614297 2181 ntBASIC26.62■■□□□ 1.85
TSPAN3O60637 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TSPAN3O60637 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TSPAN3O60637 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.61■■□□□ 1.85
TSPAN3O60637 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TSPAN3O60637 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TSPAN3O60637 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TSPAN3O60637 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TSPAN3O60637 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TSPAN3O60637 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TSPAN3O60637 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TSPAN3O60637 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms