Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCNT1O60563 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CCNT1O60563 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCNT1O60563 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCNT1O60563 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCNT1O60563 AC139426.1-201ENST00000568218 2529 ntBASIC29.58■■■□□ 2.33
CCNT1O60563 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
CCNT1O60563 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
CCNT1O60563 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCNT1O60563 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.56■■■□□ 2.32
CCNT1O60563 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCNT1O60563 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CCNT1O60563 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCNT1O60563 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.53■■■□□ 2.32
CCNT1O60563 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CCNT1O60563 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCNT1O60563 AL139393.2-201ENST00000608721 2025 ntBASIC29.51■■■□□ 2.31
CCNT1O60563 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CCNT1O60563 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.51■■■□□ 2.31
CCNT1O60563 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCNT1O60563 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CCNT1O60563 DUX4L29-201ENST00000425409 679 ntBASIC29.49■■■□□ 2.31
CCNT1O60563 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCNT1O60563 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CCNT1O60563 AC021231.2-201ENST00000594613 730 ntBASIC29.48■■■□□ 2.31
CCNT1O60563 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCNT1O60563 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCNT1O60563 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCNT1O60563 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CCNT1O60563 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CCNT1O60563 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.45■■■□□ 2.31
CCNT1O60563 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CCNT1O60563 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.44■■■□□ 2.3
CCNT1O60563 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCNT1O60563 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCNT1O60563 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.43■■■□□ 2.3
CCNT1O60563 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCNT1O60563 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCNT1O60563 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.42■■■□□ 2.3
CCNT1O60563 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.42■■■□□ 2.3
CCNT1O60563 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
CCNT1O60563 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CCNT1O60563 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCNT1O60563 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.41■■■□□ 2.3
CCNT1O60563 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.41■■■□□ 2.3
CCNT1O60563 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.41■■■□□ 2.3
CCNT1O60563 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCNT1O60563 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNT1O60563 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.4■■■□□ 2.3
CCNT1O60563 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNT1O60563 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCNT1O60563 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.4■■■□□ 2.3
CCNT1O60563 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.4■■■□□ 2.3
CCNT1O60563 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNT1O60563 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCNT1O60563 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.4■■■□□ 2.3
CCNT1O60563 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
CCNT1O60563 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCNT1O60563 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
CCNT1O60563 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCNT1O60563 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.38■■■□□ 2.29
CCNT1O60563 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.38■■■□□ 2.29
CCNT1O60563 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCNT1O60563 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCNT1O60563 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.37■■■□□ 2.29
CCNT1O60563 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNT1O60563 LINC00273-201ENST00000539813 1452 ntBASIC29.36■■■□□ 2.29
CCNT1O60563 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
CCNT1O60563 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.36■■■□□ 2.29
CCNT1O60563 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.36■■■□□ 2.29
CCNT1O60563 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNT1O60563 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CCNT1O60563 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.35■■■□□ 2.29
CCNT1O60563 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCNT1O60563 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.33■■■□□ 2.29
CCNT1O60563 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
CCNT1O60563 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNT1O60563 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.32■■■□□ 2.28
CCNT1O60563 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNT1O60563 AC135983.2-203ENST00000454486 1613 ntBASIC29.31■■■□□ 2.28
CCNT1O60563 AP004833.2-201ENST00000532228 1454 ntBASIC29.31■■■□□ 2.28
CCNT1O60563 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNT1O60563 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CCNT1O60563 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNT1O60563 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
CCNT1O60563 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CCNT1O60563 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CCNT1O60563 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.29■■■□□ 2.28
CCNT1O60563 WHAMMP2-203ENST00000563942 1603 ntBASIC29.28■■■□□ 2.28
CCNT1O60563 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.28■■■□□ 2.28
CCNT1O60563 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNT1O60563 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.28■■■□□ 2.28
CCNT1O60563 ABHD17AP4-201ENST00000411545 909 ntBASIC29.28■■■□□ 2.28
CCNT1O60563 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms