Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
ABCD4O14678 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ABCD4O14678 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCD4O14678 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ABCD4O14678 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ABCD4O14678 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
ABCD4O14678 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.75■■□□□ 1.23
ABCD4O14678 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
ABCD4O14678 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.73■■□□□ 1.23
ABCD4O14678 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCD4O14678 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCD4O14678 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
ABCD4O14678 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ABCD4O14678 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.72■■□□□ 1.23
ABCD4O14678 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ABCD4O14678 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.71■■□□□ 1.23
ABCD4O14678 ABCB10P3-201ENST00000561950 2166 ntBASIC22.71■■□□□ 1.23
ABCD4O14678 ABCB10P1-201ENST00000614297 2181 ntBASIC22.71■■□□□ 1.23
ABCD4O14678 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.71■■□□□ 1.23
ABCD4O14678 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.71■■□□□ 1.23
ABCD4O14678 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ABCD4O14678 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ABCD4O14678 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.7■■□□□ 1.22
ABCD4O14678 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.7■■□□□ 1.22
ABCD4O14678 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
ABCD4O14678 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ABCD4O14678 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.69■■□□□ 1.22
ABCD4O14678 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ABCD4O14678 AC010864.1-201ENST00000609407 1511 ntBASIC22.69■■□□□ 1.22
ABCD4O14678 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ABCD4O14678 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
ABCD4O14678 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ABCD4O14678 LINC01971-201ENST00000617888 1048 ntBASIC22.68■■□□□ 1.22
ABCD4O14678 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.68■■□□□ 1.22
ABCD4O14678 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ABCD4O14678 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.67■■□□□ 1.22
ABCD4O14678 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ABCD4O14678 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
ABCD4O14678 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.66■■□□□ 1.22
ABCD4O14678 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.66■■□□□ 1.22
ABCD4O14678 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ABCD4O14678 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ABCD4O14678 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.65■■□□□ 1.22
ABCD4O14678 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCD4O14678 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCD4O14678 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCD4O14678 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.64■■□□□ 1.21
ABCD4O14678 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ABCD4O14678 DUX4L11-201ENST00000611504 1267 ntBASIC22.64■■□□□ 1.21
ABCD4O14678 DUX4L12-201ENST00000614593 1267 ntBASIC22.64■■□□□ 1.21
ABCD4O14678 DUX4L14-201ENST00000621227 1267 ntBASIC22.64■■□□□ 1.21
ABCD4O14678 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ABCD4O14678 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCD4O14678 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCD4O14678 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCD4O14678 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ABCD4O14678 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCD4O14678 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ABCD4O14678 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCD4O14678 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ABCD4O14678 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.6■■□□□ 1.21
ABCD4O14678 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.6■■□□□ 1.21
ABCD4O14678 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.6■■□□□ 1.21
ABCD4O14678 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ABCD4O14678 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.59■■□□□ 1.21
ABCD4O14678 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.58■■□□□ 1.21
ABCD4O14678 MIR3648-2-201ENST00000581792 180 ntBASIC22.58■■□□□ 1.21
ABCD4O14678 MIR3648-1-201ENST00000615959 180 ntBASIC22.58■■□□□ 1.21
ABCD4O14678 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.58■■□□□ 1.21
ABCD4O14678 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
ABCD4O14678 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCD4O14678 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCD4O14678 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.57■■□□□ 1.2
ABCD4O14678 AC016575.1-201ENST00000607026 382 ntBASIC22.57■■□□□ 1.2
ABCD4O14678 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCD4O14678 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCD4O14678 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ABCD4O14678 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.56■■□□□ 1.2
ABCD4O14678 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ABCD4O14678 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCD4O14678 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ABCD4O14678 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCD4O14678 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCD4O14678 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.54■■□□□ 1.2
ABCD4O14678 CR559946.2-201ENST00000623684 991 ntBASIC22.54■■□□□ 1.2
ABCD4O14678 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
ABCD4O14678 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ABCD4O14678 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.54■■□□□ 1.2
ABCD4O14678 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ABCD4O14678 MIR639-201ENST00000384974 98 ntBASIC22.53■■□□□ 1.2
ABCD4O14678 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.53■■□□□ 1.2
ABCD4O14678 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.53■■□□□ 1.2
ABCD4O14678 AL135925.1-201ENST00000605920 1701 ntBASIC22.53■■□□□ 1.2
ABCD4O14678 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ABCD4O14678 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ABCD4O14678 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.52■■□□□ 1.2
ABCD4O14678 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
ABCD4O14678 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ABCD4O14678 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ABCD4O14678 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms