Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF223E7ERA6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF223E7ERA6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RNF223E7ERA6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RNF223E7ERA6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF223E7ERA6 RNF126P1-201ENST00000567452 1320 ntBASIC21.81■■□□□ 1.08
RNF223E7ERA6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF223E7ERA6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RNF223E7ERA6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF223E7ERA6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF223E7ERA6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF223E7ERA6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF223E7ERA6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF223E7ERA6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF223E7ERA6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF223E7ERA6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF223E7ERA6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF223E7ERA6 LINC00273-201ENST00000539813 1452 ntBASIC21.77■■□□□ 1.08
RNF223E7ERA6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF223E7ERA6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF223E7ERA6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF223E7ERA6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF223E7ERA6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RNF223E7ERA6 AL161658.1-201ENST00000623641 1967 ntBASIC21.74■■□□□ 1.07
RNF223E7ERA6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RNF223E7ERA6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF223E7ERA6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF223E7ERA6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RNF223E7ERA6 AC022413.1-201ENST00000624602 984 ntBASIC21.72■■□□□ 1.07
RNF223E7ERA6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF223E7ERA6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF223E7ERA6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF223E7ERA6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF223E7ERA6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF223E7ERA6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF223E7ERA6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF223E7ERA6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF223E7ERA6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF223E7ERA6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF223E7ERA6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF223E7ERA6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF223E7ERA6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF223E7ERA6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF223E7ERA6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF223E7ERA6 NTF6A-201ENST00000591175 560 ntBASIC21.66■■□□□ 1.06
RNF223E7ERA6 AC010864.1-201ENST00000609407 1511 ntBASIC21.65■■□□□ 1.06
RNF223E7ERA6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF223E7ERA6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF223E7ERA6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF223E7ERA6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF223E7ERA6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF223E7ERA6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 AC012354.3-201ENST00000623734 483 ntBASIC21.63■■□□□ 1.05
RNF223E7ERA6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF223E7ERA6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF223E7ERA6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RNF223E7ERA6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF223E7ERA6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF223E7ERA6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RNF223E7ERA6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RNF223E7ERA6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF223E7ERA6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF223E7ERA6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF223E7ERA6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RNF223E7ERA6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 AC008813.1-201ENST00000536597 885 ntBASIC21.59■■□□□ 1.05
RNF223E7ERA6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF223E7ERA6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF223E7ERA6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF223E7ERA6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF223E7ERA6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF223E7ERA6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF223E7ERA6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF223E7ERA6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms