Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.29■■■□□ 2.6
TMEM88BA6NKF7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TMEM88BA6NKF7 AC019069.1-201ENST00000610008 1333 ntBASIC31.28■■■□□ 2.6
TMEM88BA6NKF7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TMEM88BA6NKF7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TMEM88BA6NKF7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TMEM88BA6NKF7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TMEM88BA6NKF7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.27■■■□□ 2.6
TMEM88BA6NKF7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.26■■■□□ 2.59
TMEM88BA6NKF7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.25■■■□□ 2.59
TMEM88BA6NKF7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TMEM88BA6NKF7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TMEM88BA6NKF7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TMEM88BA6NKF7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.24■■■□□ 2.59
TMEM88BA6NKF7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TMEM88BA6NKF7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.24■■■□□ 2.59
TMEM88BA6NKF7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.23■■■□□ 2.59
TMEM88BA6NKF7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.23■■■□□ 2.59
TMEM88BA6NKF7 AC004987.1-201ENST00000428627 508 ntBASIC31.23■■■□□ 2.59
TMEM88BA6NKF7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.22■■■□□ 2.59
TMEM88BA6NKF7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.22■■■□□ 2.59
TMEM88BA6NKF7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.21■■■□□ 2.59
TMEM88BA6NKF7 ATP5G2P3-201ENST00000429083 425 ntBASIC31.2■■■□□ 2.59
TMEM88BA6NKF7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.2■■■□□ 2.59
TMEM88BA6NKF7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.2■■■□□ 2.59
TMEM88BA6NKF7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.18■■■□□ 2.58
TMEM88BA6NKF7 AL592295.1-201ENST00000400984 884 ntBASIC31.18■■■□□ 2.58
TMEM88BA6NKF7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.18■■■□□ 2.58
TMEM88BA6NKF7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TMEM88BA6NKF7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.16■■■□□ 2.58
TMEM88BA6NKF7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
TMEM88BA6NKF7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.15■■■□□ 2.58
TMEM88BA6NKF7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMEM88BA6NKF7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
TMEM88BA6NKF7 KRT18P60-201ENST00000312876 1297 ntBASIC31.14■■■□□ 2.58
TMEM88BA6NKF7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TMEM88BA6NKF7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.12■■■□□ 2.57
TMEM88BA6NKF7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMEM88BA6NKF7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMEM88BA6NKF7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMEM88BA6NKF7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMEM88BA6NKF7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TMEM88BA6NKF7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.09■■■□□ 2.57
TMEM88BA6NKF7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMEM88BA6NKF7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
TMEM88BA6NKF7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TMEM88BA6NKF7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TMEM88BA6NKF7 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.07■■■□□ 2.56
TMEM88BA6NKF7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TMEM88BA6NKF7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.06■■■□□ 2.56
TMEM88BA6NKF7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TMEM88BA6NKF7 LINC00273-201ENST00000539813 1452 ntBASIC31.06■■■□□ 2.56
TMEM88BA6NKF7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.04■■■□□ 2.56
TMEM88BA6NKF7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
TMEM88BA6NKF7 AL035685.1-201ENST00000636663 812 ntBASIC31.04■■■□□ 2.56
TMEM88BA6NKF7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TMEM88BA6NKF7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TMEM88BA6NKF7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.02■■■□□ 2.56
TMEM88BA6NKF7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.01■■■□□ 2.55
TMEM88BA6NKF7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.99■■■□□ 2.55
TMEM88BA6NKF7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.98■■■□□ 2.55
TMEM88BA6NKF7 AC060814.1-201ENST00000554326 538 ntBASIC30.98■■■□□ 2.55
TMEM88BA6NKF7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.98■■■□□ 2.55
TMEM88BA6NKF7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TMEM88BA6NKF7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
TMEM88BA6NKF7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TMEM88BA6NKF7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.97■■■□□ 2.55
TMEM88BA6NKF7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TMEM88BA6NKF7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TMEM88BA6NKF7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TMEM88BA6NKF7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.95■■■□□ 2.55
TMEM88BA6NKF7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.94■■■□□ 2.54
TMEM88BA6NKF7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TMEM88BA6NKF7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.93■■■□□ 2.54
TMEM88BA6NKF7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TMEM88BA6NKF7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.92■■■□□ 2.54
TMEM88BA6NKF7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.92■■■□□ 2.54
TMEM88BA6NKF7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
TMEM88BA6NKF7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TMEM88BA6NKF7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
TMEM88BA6NKF7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TMEM88BA6NKF7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
TMEM88BA6NKF7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TMEM88BA6NKF7 AL451085.2-201ENST00000605085 799 ntBASIC30.89■■■□□ 2.54
TMEM88BA6NKF7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.88■■■□□ 2.53
TMEM88BA6NKF7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TMEM88BA6NKF7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
TMEM88BA6NKF7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.87■■■□□ 2.53
TMEM88BA6NKF7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms