Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TCAF2A6NFQ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TCAF2A6NFQ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TCAF2A6NFQ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TCAF2A6NFQ2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TCAF2A6NFQ2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
TCAF2A6NFQ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TCAF2A6NFQ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.77■■□□□ 1.88
TCAF2A6NFQ2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TCAF2A6NFQ2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
TCAF2A6NFQ2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TCAF2A6NFQ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TCAF2A6NFQ2 AC127502.1-201ENST00000399971 1502 ntBASIC26.75■■□□□ 1.87
TCAF2A6NFQ2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TCAF2A6NFQ2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.75■■□□□ 1.87
TCAF2A6NFQ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TCAF2A6NFQ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TCAF2A6NFQ2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCAF2A6NFQ2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCAF2A6NFQ2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TCAF2A6NFQ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.73■■□□□ 1.87
TCAF2A6NFQ2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.73■■□□□ 1.87
TCAF2A6NFQ2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
TCAF2A6NFQ2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.72■■□□□ 1.87
TCAF2A6NFQ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.72■■□□□ 1.87
TCAF2A6NFQ2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
TCAF2A6NFQ2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.7■■□□□ 1.86
TCAF2A6NFQ2 LINC01971-201ENST00000617888 1048 ntBASIC26.7■■□□□ 1.86
TCAF2A6NFQ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.7■■□□□ 1.86
TCAF2A6NFQ2 LINC00273-201ENST00000539813 1452 ntBASIC26.69■■□□□ 1.86
TCAF2A6NFQ2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TCAF2A6NFQ2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TCAF2A6NFQ2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TCAF2A6NFQ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TCAF2A6NFQ2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TCAF2A6NFQ2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TCAF2A6NFQ2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TCAF2A6NFQ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.65■■□□□ 1.86
TCAF2A6NFQ2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.65■■□□□ 1.86
TCAF2A6NFQ2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.64■■□□□ 1.86
TCAF2A6NFQ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TCAF2A6NFQ2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
TCAF2A6NFQ2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TCAF2A6NFQ2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
TCAF2A6NFQ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.63■■□□□ 1.85
TCAF2A6NFQ2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TCAF2A6NFQ2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TCAF2A6NFQ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.62■■□□□ 1.85
TCAF2A6NFQ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.62■■□□□ 1.85
TCAF2A6NFQ2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 DUX4L11-201ENST00000611504 1267 ntBASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 DUX4L12-201ENST00000614593 1267 ntBASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 DUX4L14-201ENST00000621227 1267 ntBASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.61■■□□□ 1.85
TCAF2A6NFQ2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TCAF2A6NFQ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TCAF2A6NFQ2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TCAF2A6NFQ2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TCAF2A6NFQ2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TCAF2A6NFQ2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.56■■□□□ 1.84
TCAF2A6NFQ2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TCAF2A6NFQ2 AC135983.2-203ENST00000454486 1613 ntBASIC26.55■■□□□ 1.84
TCAF2A6NFQ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.55■■□□□ 1.84
TCAF2A6NFQ2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TCAF2A6NFQ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.54■■□□□ 1.84
TCAF2A6NFQ2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.54■■□□□ 1.84
TCAF2A6NFQ2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.54■■□□□ 1.84
TCAF2A6NFQ2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TCAF2A6NFQ2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TCAF2A6NFQ2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.53■■□□□ 1.84
TCAF2A6NFQ2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.53■■□□□ 1.84
TCAF2A6NFQ2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
TCAF2A6NFQ2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
TCAF2A6NFQ2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TCAF2A6NFQ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TCAF2A6NFQ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TCAF2A6NFQ2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TCAF2A6NFQ2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
TCAF2A6NFQ2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L13-201ENST00000554103 1267 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L15-201ENST00000611059 1267 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L23-201ENST00000615195 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L24-201ENST00000617576 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L22-201ENST00000618238 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L20-201ENST00000619712 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L21-201ENST00000622058 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L10-201ENST00000622460 1267 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 DUX4L25-201ENST00000624915 1269 ntBASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TCAF2A6NFQ2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms