Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-4A0A1B0GX49 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-4A0A1B0GX49 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-4A0A1B0GX49 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-4A0A1B0GX49 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-4A0A1B0GX49 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRBV6-4A0A1B0GX49 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRBV6-4A0A1B0GX49 AC127502.1-201ENST00000399971 1502 ntBASIC18.27■□□□□ 0.51
TRBV6-4A0A1B0GX49 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV6-4A0A1B0GX49 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-4A0A1B0GX49 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV6-4A0A1B0GX49 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-4A0A1B0GX49 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-4A0A1B0GX49 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV6-4A0A1B0GX49 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-4A0A1B0GX49 AC142086.6-201ENST00000621154 1765 ntBASIC18.25■□□□□ 0.51
TRBV6-4A0A1B0GX49 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRBV6-4A0A1B0GX49 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.23■□□□□ 0.51
TRBV6-4A0A1B0GX49 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRBV6-4A0A1B0GX49 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-4A0A1B0GX49 MIR3665-201ENST00000578708 105 ntBASIC18.22■□□□□ 0.51
TRBV6-4A0A1B0GX49 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV6-4A0A1B0GX49 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-4A0A1B0GX49 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-4A0A1B0GX49 AC108673.1-201ENST00000510422 1159 ntBASIC18.21■□□□□ 0.51
TRBV6-4A0A1B0GX49 AP006261.1-201ENST00000584783 668 ntBASIC18.21■□□□□ 0.51
TRBV6-4A0A1B0GX49 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-4A0A1B0GX49 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
TRBV6-4A0A1B0GX49 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV6-4A0A1B0GX49 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV6-4A0A1B0GX49 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 DRD5P2-201ENST00000421395 2012 ntBASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRBV6-4A0A1B0GX49 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-4A0A1B0GX49 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV6-4A0A1B0GX49 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV6-4A0A1B0GX49 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV6-4A0A1B0GX49 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-4A0A1B0GX49 DUX4L28-201ENST00000623687 678 ntBASIC18.17■□□□□ 0.5
TRBV6-4A0A1B0GX49 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-4A0A1B0GX49 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV6-4A0A1B0GX49 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-4A0A1B0GX49 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TRBV6-4A0A1B0GX49 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-4A0A1B0GX49 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV6-4A0A1B0GX49 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-4A0A1B0GX49 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-4A0A1B0GX49 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-4A0A1B0GX49 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-4A0A1B0GX49 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV6-4A0A1B0GX49 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-4A0A1B0GX49 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-4A0A1B0GX49 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-4A0A1B0GX49 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-4A0A1B0GX49 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-4A0A1B0GX49 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV6-4A0A1B0GX49 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-4A0A1B0GX49 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-4A0A1B0GX49 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 MIR6090-201ENST00000622481 60 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms