Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRBV11-1A0A0K0K1C0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV11-1A0A0K0K1C0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV11-1A0A0K0K1C0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.13■■□□□ 1.45
TRBV11-1A0A0K0K1C0 LINC01971-201ENST00000617888 1048 ntBASIC24.13■■□□□ 1.45
TRBV11-1A0A0K0K1C0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV11-1A0A0K0K1C0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.12■■□□□ 1.45
TRBV11-1A0A0K0K1C0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.11■■□□□ 1.45
TRBV11-1A0A0K0K1C0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV11-1A0A0K0K1C0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.1■■□□□ 1.45
TRBV11-1A0A0K0K1C0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TRBV11-1A0A0K0K1C0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV11-1A0A0K0K1C0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
TRBV11-1A0A0K0K1C0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV11-1A0A0K0K1C0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV11-1A0A0K0K1C0 LINC00273-201ENST00000539813 1452 ntBASIC24.08■■□□□ 1.45
TRBV11-1A0A0K0K1C0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.08■■□□□ 1.45
TRBV11-1A0A0K0K1C0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.07■■□□□ 1.44
TRBV11-1A0A0K0K1C0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.07■■□□□ 1.44
TRBV11-1A0A0K0K1C0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.07■■□□□ 1.44
TRBV11-1A0A0K0K1C0 DUX4L11-201ENST00000611504 1267 ntBASIC24.06■■□□□ 1.44
TRBV11-1A0A0K0K1C0 DUX4L12-201ENST00000614593 1267 ntBASIC24.06■■□□□ 1.44
TRBV11-1A0A0K0K1C0 DUX4L14-201ENST00000621227 1267 ntBASIC24.06■■□□□ 1.44
TRBV11-1A0A0K0K1C0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
TRBV11-1A0A0K0K1C0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.05■■□□□ 1.44
TRBV11-1A0A0K0K1C0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.04■■□□□ 1.44
TRBV11-1A0A0K0K1C0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
TRBV11-1A0A0K0K1C0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRBV11-1A0A0K0K1C0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TRBV11-1A0A0K0K1C0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.02■■□□□ 1.44
TRBV11-1A0A0K0K1C0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRBV11-1A0A0K0K1C0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.01■■□□□ 1.43
TRBV11-1A0A0K0K1C0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.01■■□□□ 1.43
TRBV11-1A0A0K0K1C0 HLA-V-202ENST00000446817 847 ntBASIC24.01■■□□□ 1.43
TRBV11-1A0A0K0K1C0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRBV11-1A0A0K0K1C0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRBV11-1A0A0K0K1C0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRBV11-1A0A0K0K1C0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24■■□□□ 1.43
TRBV11-1A0A0K0K1C0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24■■□□□ 1.43
TRBV11-1A0A0K0K1C0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRBV11-1A0A0K0K1C0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.99■■□□□ 1.43
TRBV11-1A0A0K0K1C0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.99■■□□□ 1.43
TRBV11-1A0A0K0K1C0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.99■■□□□ 1.43
TRBV11-1A0A0K0K1C0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.99■■□□□ 1.43
TRBV11-1A0A0K0K1C0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRBV11-1A0A0K0K1C0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV11-1A0A0K0K1C0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV11-1A0A0K0K1C0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRBV11-1A0A0K0K1C0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRBV11-1A0A0K0K1C0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.97■■□□□ 1.43
TRBV11-1A0A0K0K1C0 ABCB10P1-201ENST00000614297 2181 ntBASIC23.96■■□□□ 1.43
TRBV11-1A0A0K0K1C0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.96■■□□□ 1.43
TRBV11-1A0A0K0K1C0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV11-1A0A0K0K1C0 MIR3648-2-201ENST00000581792 180 ntBASIC23.95■■□□□ 1.42
TRBV11-1A0A0K0K1C0 MIR3648-1-201ENST00000615959 180 ntBASIC23.95■■□□□ 1.42
TRBV11-1A0A0K0K1C0 CR559946.2-201ENST00000623684 991 ntBASIC23.95■■□□□ 1.42
TRBV11-1A0A0K0K1C0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV11-1A0A0K0K1C0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L13-201ENST00000554103 1267 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L15-201ENST00000611059 1267 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L23-201ENST00000615195 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L24-201ENST00000617576 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L22-201ENST00000618238 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L20-201ENST00000619712 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L21-201ENST00000622058 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L10-201ENST00000622460 1267 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DUX4L25-201ENST00000624915 1269 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AC135983.2-203ENST00000454486 1613 ntBASIC23.94■■□□□ 1.42
TRBV11-1A0A0K0K1C0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AC016575.1-201ENST00000607026 382 ntBASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV11-1A0A0K0K1C0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRBV11-1A0A0K0K1C0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV11-1A0A0K0K1C0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.9■■□□□ 1.42
TRBV11-1A0A0K0K1C0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.9■■□□□ 1.42
TRBV11-1A0A0K0K1C0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRBV11-1A0A0K0K1C0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRBV11-1A0A0K0K1C0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms