Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-6A0A0B4J262 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV8-6A0A0B4J262 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-6A0A0B4J262 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV8-6A0A0B4J262 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 SETD8P1-201ENST00000623146 1180 ntBASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-6A0A0B4J262 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TRAV8-6A0A0B4J262 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-6A0A0B4J262 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-6A0A0B4J262 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-6A0A0B4J262 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-6A0A0B4J262 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-6A0A0B4J262 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-6A0A0B4J262 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV8-6A0A0B4J262 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRAV8-6A0A0B4J262 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-6A0A0B4J262 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV8-6A0A0B4J262 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-6A0A0B4J262 AL121749.1-202ENST00000609313 2153 ntBASIC18.71■□□□□ 0.59
TRAV8-6A0A0B4J262 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-6A0A0B4J262 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 AL133380.1-201ENST00000506013 324 ntBASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-6A0A0B4J262 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-6A0A0B4J262 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV8-6A0A0B4J262 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-6A0A0B4J262 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-6A0A0B4J262 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-6A0A0B4J262 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-6A0A0B4J262 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV8-6A0A0B4J262 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV8-6A0A0B4J262 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV8-6A0A0B4J262 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-6A0A0B4J262 ST7-AS1-201ENST00000456775 1889 ntBASIC18.65■□□□□ 0.58
TRAV8-6A0A0B4J262 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV8-6A0A0B4J262 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-6A0A0B4J262 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-6A0A0B4J262 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-6A0A0B4J262 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-6A0A0B4J262 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-6A0A0B4J262 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.62■□□□□ 0.57
TRAV8-6A0A0B4J262 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TRAV8-6A0A0B4J262 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-6A0A0B4J262 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-6A0A0B4J262 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-6A0A0B4J262 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 AC097358.2-201ENST00000607541 1159 ntBASIC18.61■□□□□ 0.57
TRAV8-6A0A0B4J262 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV8-6A0A0B4J262 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV8-6A0A0B4J262 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV8-6A0A0B4J262 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 WASH5P-204ENST00000632292 975 ntBASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV8-6A0A0B4J262 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV8-6A0A0B4J262 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRAV8-6A0A0B4J262 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRAV8-6A0A0B4J262 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-6A0A0B4J262 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-6A0A0B4J262 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV8-6A0A0B4J262 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-6A0A0B4J262 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV8-6A0A0B4J262 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV8-6A0A0B4J262 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms