Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MAPK10-323ENST00000641493 3207 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 PUDPP2-201ENST00000431423 643 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 NUCKS1P1-201ENST00000452067 703 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AP002004.1-206ENST00000532441 876 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC079866.1-201ENST00000534985 1220 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC089984.3-201ENST00000552838 363 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC063962.1-201ENST00000608199 521 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC005899.6-201ENST00000620729 297 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 AC073263.3-201ENST00000624449 858 ntBASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CLIP2Q9UDT6 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 LPAL2-203ENST00000454031 2498 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AL773545.3-201ENST00000414297 706 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AL845321.1-201ENST00000444603 348 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CEACAMP5-201ENST00000448037 961 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 RN7SKP11-201ENST00000517018 287 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CARSP2-201ENST00000520688 277 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 HMGN1P26-201ENST00000558737 303 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AC027796.1-201ENST00000575593 512 ntBASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.28□□□□□ -1.08
CLIP2Q9UDT6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.27□□□□□ -1.08
CLIP2Q9UDT6 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CLIP2Q9UDT6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CLIP2Q9UDT6 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
CLIP2Q9UDT6 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CLIP2Q9UDT6 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AL136100.1-201ENST00000407696 330 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 VN1R66P-201ENST00000412929 916 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 OR51P1P-201ENST00000447547 942 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 RN7SL267P-201ENST00000485107 261 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 RN7SL655P-201ENST00000486087 298 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 OR4A1P-201ENST00000532342 920 ntBASIC8.27□□□□□ -1.09
CLIP2Q9UDT6 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms