Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HMGA1P17096 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGA1P17096 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.16□□□□□ -1.26
HMGA1P17096 AC111186.1-201ENST00000604684 130 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 GAPDHP41-201ENST00000613707 975 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGA1P17096 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
HMGA1P17096 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGA1P17096 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 RNA5SP474-201ENST00000391234 90 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 UBBP1-201ENST00000392399 473 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 AC121334.1-201ENST00000396414 802 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 RPL12P23-201ENST00000405880 490 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGA1P17096 RN7SL216P-201ENST00000471607 298 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC098818.1-201ENST00000478593 252 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 RPS4XP23-201ENST00000487801 237 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC112225.1-201ENST00000508230 297 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGA1P17096 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGA1P17096 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGA1P17096 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGA1P17096 MIR212-201ENST00000586026 110 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC009779.8-202ENST00000607990 932 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 MIR6780B-201ENST00000610307 79 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 AC068726.1-201ENST00000610993 341 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HMGA1P17096 AC011447.6-201ENST00000623510 2598 ntBASIC7.15□□□□□ -1.26
HMGA1P17096 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
HMGA1P17096 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.15□□□□□ -1.27
HMGA1P17096 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.15□□□□□ -1.27
HMGA1P17096 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
HMGA1P17096 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC7.15□□□□□ -1.27
HMGA1P17096 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGA1P17096 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HMGA1P17096 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 OR7A2P-201ENST00000304105 930 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 RNA5SP85-201ENST00000365378 119 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HMGA1P17096 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.14□□□□□ -1.27
HMGA1P17096 AL133260.1-201ENST00000405720 405 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 AC099535.1-201ENST00000408928 371 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 RN7SKP38-201ENST00000410782 309 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.14□□□□□ -1.27
HMGA1P17096 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 GAPDHP19-201ENST00000431768 1005 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 AC092601.1-201ENST00000444526 383 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGA1P17096 AKR1D1P1-201ENST00000457236 936 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 RN7SL187P-201ENST00000495587 303 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGA1P17096 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGA1P17096 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms