Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 APOC2-205ENST00000592257 444 ntTSL 3 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 AC114477.1-201ENST00000605097 605 ntBASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CDC42BPAQ5VT25 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 PSMA6P1-201ENST00000400275 741 ntBASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 AL929472.1-201ENST00000417484 429 ntBASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 AC021220.1-201ENST00000507445 630 ntBASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
CDC42BPAQ5VT25 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 ASNSP6-201ENST00000592770 1618 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 METTL5-204ENST00000409340 472 ntTSL 5 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 RN7SKP296-201ENST00000411185 341 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 RPL23AP85-201ENST00000421838 433 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 RPS10P20-201ENST00000494130 463 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 SYPL1P2-201ENST00000582878 727 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 IGKV2OR2-1-201ENST00000605129 304 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AP001052.1-201ENST00000626421 99 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 AC104837.1-201ENST00000444644 1587 ntBASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CDC42BPAQ5VT25 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AL162632.2-201ENST00000553933 399 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 RN7SL199P-201ENST00000578752 281 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 RN7SL656P-201ENST00000579044 281 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AP000577.1-201ENST00000624366 878 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 SAMMSON-214ENST00000641395 1264 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 YWHAZP4-201ENST00000392459 708 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 AC245047.5-201ENST00000437312 556 ntBASIC10.19□□□□□ -0.78
CDC42BPAQ5VT25 ZNF519P4-201ENST00000514008 125 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms