Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 Z99129.4-201ENST00000624649 2435 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 SNORD51.1-201ENST00000365405 77 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 RAB9AP4-201ENST00000415230 609 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 RBMY2JP-201ENST00000425544 1059 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC104698.1-201ENST00000435671 276 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 SNX18P9-201ENST00000440580 835 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC079944.1-201ENST00000485426 495 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC066616.1-201ENST00000486795 413 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 RN7SL569P-201ENST00000494652 288 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 OR7E163P-201ENST00000505943 894 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC016559.1-201ENST00000511420 199 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC068631.3-201ENST00000538831 225 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 CKS1BP1-201ENST00000555221 240 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.66□□□□□ -1.34
SUMO3P55854 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC126365.2-201ENST00000580630 379 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 MIR4258-201ENST00000580920 91 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC015801.1-201ENST00000585651 153 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC242628.1-201ENST00000606810 391 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.66□□□□□ -1.34
SUMO3P55854 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 AC022306.3-201ENST00000619930 550 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 FGL2-202ENST00000637771 989 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 AC005261.6-201ENST00000623072 1387 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 CASC19-205ENST00000641013 1411 ntBASIC6.66□□□□□ -1.34
SUMO3P55854 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
SUMO3P55854 AC004014.2-201ENST00000623718 5122 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SUMO3P55854 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 OR10AB1P-202ENST00000641219 1686 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.65□□□□□ -1.34
SUMO3P55854 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.65□□□□□ -1.34
SUMO3P55854 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SUMO3P55854 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 RNA5SP218-201ENST00000363188 109 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 RNA5SP396-201ENST00000364834 120 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.65□□□□□ -1.34
SUMO3P55854 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SUMO3P55854 RAB5CP1-201ENST00000395972 580 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.65□□□□□ -1.34
SUMO3P55854 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC6.65□□□□□ -1.34
SUMO3P55854 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SUMO3P55854 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.65□□□□□ -1.34
SUMO3P55854 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SUMO3P55854 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.65□□□□□ -1.34
SUMO3P55854 RN7SL688P-201ENST00000471754 275 ntBASIC6.65□□□□□ -1.34
SUMO3P55854 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms