Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.83□□□□□ -1
COL15A1P39059 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 SDHCP3-201ENST00000445371 506 ntBASIC8.83□□□□□ -1
COL15A1P39059 AC234771.2-201ENST00000445718 597 ntBASIC8.83□□□□□ -1
COL15A1P39059 EEF1B2P3-201ENST00000447718 678 ntBASIC8.83□□□□□ -1
COL15A1P39059 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.83□□□□□ -1
COL15A1P39059 AKR1D1P1-201ENST00000457236 936 ntBASIC8.83□□□□□ -1
COL15A1P39059 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 RNA5SP278-201ENST00000517055 102 ntBASIC8.83□□□□□ -1
COL15A1P39059 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.83□□□□□ -1
COL15A1P39059 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.83□□□□□ -1
COL15A1P39059 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.83□□□□□ -1
COL15A1P39059 AC009729.1-201ENST00000548873 1133 ntBASIC8.83□□□□□ -1
COL15A1P39059 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
COL15A1P39059 AC010463.3-201ENST00000594077 500 ntBASIC8.83□□□□□ -1
COL15A1P39059 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.83□□□□□ -1
COL15A1P39059 AL683826.1-201ENST00000624104 627 ntBASIC8.83□□□□□ -1
COL15A1P39059 AC073593.1-201ENST00000624500 411 ntBASIC8.83□□□□□ -1
COL15A1P39059 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.83□□□□□ -1
COL15A1P39059 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.82□□□□□ -1
COL15A1P39059 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 AC008124.1-201ENST00000609803 9730 ntBASIC8.82□□□□□ -1
COL15A1P39059 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 RNU1-65P-201ENST00000363919 148 ntBASIC8.82□□□□□ -1
COL15A1P39059 VIM2P-201ENST00000402383 1294 ntBASIC8.82□□□□□ -1
COL15A1P39059 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.82□□□□□ -1
COL15A1P39059 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 PRDX1P1-201ENST00000449329 596 ntBASIC8.82□□□□□ -1
COL15A1P39059 AC068491.1-201ENST00000449539 1241 ntBASIC8.82□□□□□ -1
COL15A1P39059 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 AC118758.1-202ENST00000454719 225 ntBASIC8.82□□□□□ -1
COL15A1P39059 NMNAT1P3-201ENST00000457517 888 ntBASIC8.82□□□□□ -1
COL15A1P39059 PSMA6P2-201ENST00000457574 686 ntBASIC8.82□□□□□ -1
COL15A1P39059 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.82□□□□□ -1
COL15A1P39059 AC093816.1-201ENST00000515076 913 ntBASIC8.82□□□□□ -1
COL15A1P39059 RNA5SP318-201ENST00000516352 92 ntBASIC8.82□□□□□ -1
COL15A1P39059 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC8.82□□□□□ -1
COL15A1P39059 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.82□□□□□ -1
COL15A1P39059 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.82□□□□□ -1
COL15A1P39059 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.82□□□□□ -1
COL15A1P39059 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.82□□□□□ -1
COL15A1P39059 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
COL15A1P39059 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.82□□□□□ -1
COL15A1P39059 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL15A1P39059 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.81□□□□□ -1
COL15A1P39059 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.81□□□□□ -1
COL15A1P39059 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 AL590128.1-201ENST00000433407 286 ntBASIC8.81□□□□□ -1
COL15A1P39059 RN7SL379P-201ENST00000479912 293 ntBASIC8.81□□□□□ -1
COL15A1P39059 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.81□□□□□ -1
COL15A1P39059 AC112225.1-201ENST00000508230 297 ntBASIC8.81□□□□□ -1
COL15A1P39059 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.81□□□□□ -1
COL15A1P39059 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.81□□□□□ -1
COL15A1P39059 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.81□□□□□ -1
COL15A1P39059 ACTG1P15-201ENST00000570019 1063 ntBASIC8.81□□□□□ -1
COL15A1P39059 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.81□□□□□ -1
COL15A1P39059 AC012676.3-201ENST00000614983 479 ntBASIC8.81□□□□□ -1
COL15A1P39059 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL15A1P39059 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms