Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PTTG3P-201ENST00000521862 606 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC140063.1-201ENST00000541343 259 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC007068.2-201ENST00000543168 395 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 RPL29P33-201ENST00000587474 316 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGA1P17096 DIMT1P1-201ENST00000603970 763 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 MIR6823-201ENST00000622118 61 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 AC005514.1-201ENST00000623521 208 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.18□□□□□ -1.26
HMGA1P17096 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGA1P17096 AC010132.4-201ENST00000569883 1368 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 MAPK10-379ENST00000642013 1385 ntBASIC7.18□□□□□ -1.26
HMGA1P17096 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGA1P17096 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HMGA1P17096 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGA1P17096 AL590128.1-201ENST00000433407 286 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AC128677.1-201ENST00000436016 442 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 AC099340.1-201ENST00000475247 599 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AC131233.1-201ENST00000479200 955 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AL117692.1-201ENST00000494283 713 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 SNX18P23-201ENST00000510867 677 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGA1P17096 AL390877.1-201ENST00000605704 214 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 MIR6503-201ENST00000622884 86 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGA1P17096 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGA1P17096 MAPK10-371ENST00000641952 5209 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 ZNF806-201ENST00000438300 1774 ntBASIC7.17□□□□□ -1.26
HMGA1P17096 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGA1P17096 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
HMGA1P17096 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGA1P17096 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGA1P17096 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGA1P17096 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 DDX43P1-201ENST00000510713 1763 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGA1P17096 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 RPL9P21-201ENST00000392269 505 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGA1P17096 UBTFL2-201ENST00000411859 1191 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AC244452.1-201ENST00000413798 141 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGA1P17096 AC096632.2-201ENST00000438139 1239 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 GAPDHP20-201ENST00000444107 1007 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGA1P17096 AC099670.1-201ENST00000455141 783 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AC015524.1-201ENST00000491585 472 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGA1P17096 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGA1P17096 AC116917.1-201ENST00000520558 305 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGA1P17096 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.16□□□□□ -1.26
HMGA1P17096 OR9G2P-201ENST00000533326 880 ntBASIC7.16□□□□□ -1.26
HMGA1P17096 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms