Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 SNORA70G-201ENST00000383923 142 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 VN1R66P-201ENST00000412929 916 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.87□□□□□ -0.99
COL15A1P39059 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.87□□□□□ -0.99
COL15A1P39059 AL354893.1-201ENST00000433735 348 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 DNAJA1P6-201ENST00000437347 354 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.87□□□□□ -0.99
COL15A1P39059 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.87□□□□□ -0.99
COL15A1P39059 CTSLP6-201ENST00000458273 1002 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 RN7SL170P-201ENST00000487098 295 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.87□□□□□ -0.99
COL15A1P39059 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.87□□□□□ -0.99
COL15A1P39059 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 Vault.2-201ENST00000516519 98 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.87□□□□□ -0.99
COL15A1P39059 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.87□□□□□ -0.99
COL15A1P39059 SETP17-201ENST00000534163 817 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 RPL29P33-201ENST00000587474 316 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 WBP1LP12-201ENST00000604449 331 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.87□□□□□ -0.99
COL15A1P39059 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
COL15A1P39059 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.87□□□□□ -0.99
COL15A1P39059 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.87□□□□□ -0.99
COL15A1P39059 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.87□□□□□ -0.99
COL15A1P39059 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
COL15A1P39059 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 GAPDHP37-201ENST00000442317 968 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC104339.1-201ENST00000465478 348 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 OR7E22P-201ENST00000478335 1035 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 RN7SKP196-201ENST00000516267 345 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC007537.1-201ENST00000539347 327 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.86□□□□□ -0.99
COL15A1P39059 AL499605.1-201ENST00000604628 403 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AP005212.3-201ENST00000619964 528 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AL591926.1-201ENST00000620542 217 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 TPTE2P2-201ENST00000403471 1466 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 RNA5SP232-201ENST00000364144 119 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 GSTA6P-201ENST00000424144 582 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 TIMM8BP2-201ENST00000445940 251 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 RN7SL654P-201ENST00000479178 292 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.86□□□□□ -0.99
COL15A1P39059 OR4A41P-201ENST00000533053 928 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.86□□□□□ -0.99
COL15A1P39059 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
COL15A1P39059 MIR3135A-201ENST00000578460 77 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.86□□□□□ -0.99
COL15A1P39059 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.86□□□□□ -0.99
COL15A1P39059 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL15A1P39059 CASC19-232ENST00000641480 1244 ntBASIC8.86□□□□□ -0.99
COL15A1P39059 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.85□□□□□ -0.99
COL15A1P39059 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms