Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.71□□□□□ -1.34
SUMO3P55854 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.71□□□□□ -1.34
SUMO3P55854 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.71□□□□□ -1.34
SUMO3P55854 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.71□□□□□ -1.34
SUMO3P55854 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
SUMO3P55854 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SUMO3P55854 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SUMO3P55854 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 SNORA30B-201ENST00000365319 129 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 RNA5SP427-201ENST00000365323 119 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 RN7SKP1-201ENST00000365525 307 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 FTH1P26-201ENST00000406512 701 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 VN1R31P-201ENST00000417498 730 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AL593856.1-201ENST00000419949 805 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 FDPSP1-201ENST00000424976 1071 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 AC073900.1-201ENST00000429766 776 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 AL731892.1-201ENST00000437364 1192 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 RPL31P20-201ENST00000449593 360 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AC018892.2-201ENST00000457656 693 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 CAB39P1-201ENST00000502277 460 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 PCNAP1-201ENST00000505363 709 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 Vault.2-201ENST00000516519 98 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 VDAC2P2-201ENST00000544463 901 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 AC013283.1-201ENST00000557282 492 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AC027176.2-201ENST00000559166 746 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 MIR5705-201ENST00000579870 89 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.7□□□□□ -1.34
SUMO3P55854 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.7□□□□□ -1.34
SUMO3P55854 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.7□□□□□ -1.34
SUMO3P55854 BNIP3P27-201ENST00000599991 412 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AL139022.2-201ENST00000606934 443 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 AL121583.1-201ENST00000612444 682 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 AC087893.2-201ENST00000623272 255 ntBASIC6.7□□□□□ -1.34
SUMO3P55854 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.7□□□□□ -1.34
SUMO3P55854 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SUMO3P55854 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SUMO3P55854 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.69□□□□□ -1.34
SUMO3P55854 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
SUMO3P55854 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SUMO3P55854 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
SUMO3P55854 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SUMO3P55854 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.69□□□□□ -1.34
SUMO3P55854 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SUMO3P55854 MIR365B-201ENST00000362317 111 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms