Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 TRIM51HP-202ENST00000530412 1823 ntBASIC8.47□□□□□ -1.05
SNED1Q8TER0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SNED1Q8TER0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNED1Q8TER0 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL773545.3-201ENST00000414297 706 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL354794.2-201ENST00000424795 1248 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 GAPDHP20-201ENST00000444107 1007 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC093870.1-201ENST00000506837 213 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC011853.1-201ENST00000518911 454 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 OR4A1P-201ENST00000532342 920 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AC010325.3-201ENST00000641084 394 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 CASC19-232ENST00000641480 1244 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 CASC19-274ENST00000642018 970 ntBASIC8.46□□□□□ -1.05
SNED1Q8TER0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNED1Q8TER0 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
SNED1Q8TER0 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 RNA5SP140-201ENST00000364524 92 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 RNA5SP279-201ENST00000365513 117 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 VN1R53P-201ENST00000429536 957 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AC066616.1-201ENST00000486795 413 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNED1Q8TER0 AP005597.2-201ENST00000526238 341 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 AC006512.2-201ENST00000543250 486 ntBASIC8.46□□□□□ -1.06
SNED1Q8TER0 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.46□□□□□ -1.06
SNED1Q8TER0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.45□□□□□ -1.06
SNED1Q8TER0 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 Z97832.2-201ENST00000605896 4261 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 AP002991.2-201ENST00000623807 2801 ntBASIC8.45□□□□□ -1.06
SNED1Q8TER0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNED1Q8TER0 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms