Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RSPO4Q2I0M5 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
RSPO4Q2I0M5 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RSPO4Q2I0M5 AC008739.5-201ENST00000623035 1938 ntBASIC7.9□□□□□ -1.15
RSPO4Q2I0M5 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC004023.1-201ENST00000561473 1744 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC067942.1-201ENST00000488045 1493 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RNU5A-2P-201ENST00000384337 116 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MIR551B-201ENST00000384984 96 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MARK2P12-201ENST00000420129 585 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CARM1P1-201ENST00000426329 1185 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MGAT2P2-201ENST00000427194 797 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AL604028.2-201ENST00000437848 788 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RPS24P1-201ENST00000438550 371 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RPL3P10-201ENST00000476002 1164 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RPL23AP73-201ENST00000492507 471 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RN7SL653P-201ENST00000494134 293 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 KRT18P54-201ENST00000513396 748 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 PRELID3BP4-201ENST00000515476 571 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC118273.2-201ENST00000532092 465 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CHEK2P2-201ENST00000554701 672 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 COX6CP11-201ENST00000555293 229 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 FAM30C-201ENST00000561158 410 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC138207.8-204ENST00000579588 527 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AP005262.1-201ENST00000582646 997 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MIR4310-201ENST00000582950 57 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC020915.5-201ENST00000596836 964 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC004067.1-201ENST00000608733 700 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AL137246.2-201ENST00000613439 662 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 RPS2P45-201ENST00000469997 2057 ntBASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RSPO4Q2I0M5 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 ATP5A1P3-201ENST00000573189 1507 ntBASIC7.88□□□□□ -1.15
RSPO4Q2I0M5 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms