RNA–Protein interactions for RNA: ENST00000558246.1

AC087477.5-201, humanhuman

TSL 3 BASIC

Gene AC087477.5, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.5-201ENST00000558246 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
AC087477.5-201ENST00000558246 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
AC087477.5-201ENST00000558246 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
AC087477.5-201ENST00000558246 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
AC087477.5-201ENST00000558246 FOXD1Q16676 465 aa20.88■□□□□ 0.93
AC087477.5-201ENST00000558246 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
AC087477.5-201ENST00000558246 MSH5O43196 834 aa19.64■□□□□ 0.73
AC087477.5-201ENST00000558246 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
AC087477.5-201ENST00000558246 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
AC087477.5-201ENST00000558246 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
AC087477.5-201ENST00000558246 ADRA2BP18089 450 aa19.3■□□□□ 0.68
AC087477.5-201ENST00000558246 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
AC087477.5-201ENST00000558246 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
AC087477.5-201ENST00000558246 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
AC087477.5-201ENST00000558246 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
AC087477.5-201ENST00000558246 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
AC087477.5-201ENST00000558246 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
AC087477.5-201ENST00000558246 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
AC087477.5-201ENST00000558246 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
AC087477.5-201ENST00000558246 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
AC087477.5-201ENST00000558246 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
AC087477.5-201ENST00000558246 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
AC087477.5-201ENST00000558246 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
AC087477.5-201ENST00000558246 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
AC087477.5-201ENST00000558246 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
AC087477.5-201ENST00000558246 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
AC087477.5-201ENST00000558246 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
AC087477.5-201ENST00000558246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
AC087477.5-201ENST00000558246 ABCC9O60706 1549 aa16.07■□□□□ 0.16
AC087477.5-201ENST00000558246 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
AC087477.5-201ENST00000558246 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
AC087477.5-201ENST00000558246 KCNA4P22459 653 aa15.8■□□□□ 0.12
AC087477.5-201ENST00000558246 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
AC087477.5-201ENST00000558246 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
AC087477.5-201ENST00000558246 CAPN15O75808 1086 aa15.63■□□□□ 0.09
AC087477.5-201ENST00000558246 DSG3P32926 999 aa15.6■□□□□ 0.09
AC087477.5-201ENST00000558246 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
AC087477.5-201ENST00000558246 APLP2Q06481 763 aa15.44■□□□□ 0.06
AC087477.5-201ENST00000558246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
AC087477.5-201ENST00000558246 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
AC087477.5-201ENST00000558246 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
AC087477.5-201ENST00000558246 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
AC087477.5-201ENST00000558246 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
AC087477.5-201ENST00000558246 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
AC087477.5-201ENST00000558246 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
AC087477.5-201ENST00000558246 NACADO15069 1562 aa15.28■□□□□ 0.04
AC087477.5-201ENST00000558246 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
AC087477.5-201ENST00000558246 ABCB7O75027 752 aa15.23■□□□□ 0.03
AC087477.5-201ENST00000558246 POTEHQ6S545 545 aa15.19■□□□□ 0.02
AC087477.5-201ENST00000558246 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
AC087477.5-201ENST00000558246 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
AC087477.5-201ENST00000558246 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
AC087477.5-201ENST00000558246 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
AC087477.5-201ENST00000558246 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
AC087477.5-201ENST00000558246 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
AC087477.5-201ENST00000558246 POLA2Q14181 598 aa14.91□□□□□ -0.02
AC087477.5-201ENST00000558246 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
AC087477.5-201ENST00000558246 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
AC087477.5-201ENST00000558246 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
AC087477.5-201ENST00000558246 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
AC087477.5-201ENST00000558246 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
AC087477.5-201ENST00000558246 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
AC087477.5-201ENST00000558246 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
AC087477.5-201ENST00000558246 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
AC087477.5-201ENST00000558246 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
AC087477.5-201ENST00000558246 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
AC087477.5-201ENST00000558246 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
AC087477.5-201ENST00000558246 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
AC087477.5-201ENST00000558246 ZBTB22O15209 634 aa14.51□□□□□ -0.09
AC087477.5-201ENST00000558246 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
AC087477.5-201ENST00000558246 ATXN8OSP0DMR3 200 aa14.43□□□□□ -0.1
AC087477.5-201ENST00000558246 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
AC087477.5-201ENST00000558246 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
AC087477.5-201ENST00000558246 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
AC087477.5-201ENST00000558246 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
AC087477.5-201ENST00000558246 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
AC087477.5-201ENST00000558246 WIZO95785 1651 aa14.3□□□□□ -0.12
AC087477.5-201ENST00000558246 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
AC087477.5-201ENST00000558246 HRCP23327 699 aa14.25□□□□□ -0.13
AC087477.5-201ENST00000558246 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
AC087477.5-201ENST00000558246 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
AC087477.5-201ENST00000558246 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
AC087477.5-201ENST00000558246 FBLN2P98095 1184 aa14.19□□□□□ -0.14
AC087477.5-201ENST00000558246 TRIM26Q12899 539 aaPredicted RBP14.19□□□□□ -0.14
AC087477.5-201ENST00000558246 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
AC087477.5-201ENST00000558246 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
AC087477.5-201ENST00000558246 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC087477.5-201ENST00000558246 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
AC087477.5-201ENST00000558246 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
AC087477.5-201ENST00000558246 EEA1Q15075 1411 aa14.13□□□□□ -0.15
AC087477.5-201ENST00000558246 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
AC087477.5-201ENST00000558246 LOC105371045A0A1W2PR82 267 aa14.12□□□□□ -0.15
AC087477.5-201ENST00000558246 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
AC087477.5-201ENST00000558246 PCGF6Q9BYE7 350 aa14.11□□□□□ -0.15
AC087477.5-201ENST00000558246 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
AC087477.5-201ENST00000558246 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
AC087477.5-201ENST00000558246 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
AC087477.5-201ENST00000558246 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
AC087477.5-201ENST00000558246 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
AC087477.5-201ENST00000558246 HAX1O00165 279 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms