Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC9.81□□□□□ -0.84
CPS1P31327 RPL12P13-201ENST00000310055 497 ntBASIC9.81□□□□□ -0.84
CPS1P31327 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC9.81□□□□□ -0.84
CPS1P31327 RPS10P21-201ENST00000430654 475 ntBASIC9.81□□□□□ -0.84
CPS1P31327 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 AMYP1-201ENST00000440059 1023 ntBASIC9.81□□□□□ -0.84
CPS1P31327 NUCKS1P1-201ENST00000452067 703 ntBASIC9.81□□□□□ -0.84
CPS1P31327 AC010878.1-201ENST00000456500 1047 ntBASIC9.81□□□□□ -0.84
CPS1P31327 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC9.81□□□□□ -0.84
CPS1P31327 RN7SL254P-201ENST00000460609 284 ntBASIC9.81□□□□□ -0.84
CPS1P31327 PFN2-209ENST00000481275 560 ntTSL 4 BASIC9.81□□□□□ -0.84
CPS1P31327 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC9.81□□□□□ -0.84
CPS1P31327 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC9.81□□□□□ -0.84
CPS1P31327 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC9.81□□□□□ -0.84
CPS1P31327 IGHVIII-26-1-201ENST00000520387 250 ntBASIC9.81□□□□□ -0.84
CPS1P31327 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC9.81□□□□□ -0.84
CPS1P31327 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC9.81□□□□□ -0.84
CPS1P31327 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.81□□□□□ -0.84
CPS1P31327 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC9.81□□□□□ -0.84
CPS1P31327 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CPS1P31327 AP005212.3-201ENST00000619964 528 ntBASIC9.81□□□□□ -0.84
CPS1P31327 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 AP000542.3-201ENST00000623391 6114 ntBASIC9.8□□□□□ -0.84
CPS1P31327 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC9.8□□□□□ -0.84
CPS1P31327 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CPS1P31327 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 VN1R66P-201ENST00000412929 916 ntBASIC9.8□□□□□ -0.84
CPS1P31327 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 AC073109.1-201ENST00000445066 978 ntBASIC9.8□□□□□ -0.84
CPS1P31327 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC9.8□□□□□ -0.84
CPS1P31327 HMGN1P17-201ENST00000513734 295 ntBASIC9.8□□□□□ -0.84
CPS1P31327 RPL41P2-201ENST00000544920 409 ntBASIC9.8□□□□□ -0.84
CPS1P31327 AC090826.1-203ENST00000569235 490 ntBASIC9.8□□□□□ -0.84
CPS1P31327 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.8□□□□□ -0.84
CPS1P31327 BNIP3P32-201ENST00000600015 554 ntBASIC9.8□□□□□ -0.84
CPS1P31327 FAM72A-208ENST00000607379 1139 ntBASIC9.8□□□□□ -0.84
CPS1P31327 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC9.8□□□□□ -0.84
CPS1P31327 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 UBTFL11-201ENST00000428234 2252 ntBASIC9.8□□□□□ -0.84
CPS1P31327 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CPS1P31327 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
CPS1P31327 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.79□□□□□ -0.84
CPS1P31327 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC9.79□□□□□ -0.84
CPS1P31327 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 GAPDHP48-201ENST00000436626 961 ntBASIC9.79□□□□□ -0.84
CPS1P31327 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC008638.1-201ENST00000506035 866 ntBASIC9.79□□□□□ -0.84
CPS1P31327 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC007537.1-201ENST00000539347 327 ntBASIC9.79□□□□□ -0.84
CPS1P31327 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.79□□□□□ -0.84
CPS1P31327 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC9.79□□□□□ -0.84
CPS1P31327 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 AC061999.1-201ENST00000624454 177 ntBASIC9.79□□□□□ -0.84
CPS1P31327 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CPS1P31327 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CPS1P31327 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CPS1P31327 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CPS1P31327 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CPS1P31327 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CPS1P31327 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CPS1P31327 AC004386.1-201ENST00000393214 761 ntBASIC9.78□□□□□ -0.84
CPS1P31327 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC9.78□□□□□ -0.84
CPS1P31327 VPS25P1-201ENST00000455691 508 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms