Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.2□□□□□ -1.1
COL4A5P29400 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.2□□□□□ -1.1
COL4A5P29400 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC8.2□□□□□ -1.1
COL4A5P29400 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
COL4A5P29400 COX6B1P4-201ENST00000519826 484 ntBASIC8.2□□□□□ -1.1
COL4A5P29400 AC009879.1-201ENST00000520029 839 ntBASIC8.2□□□□□ -1.1
COL4A5P29400 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.2□□□□□ -1.1
COL4A5P29400 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.2□□□□□ -1.1
COL4A5P29400 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.2□□□□□ -1.1
COL4A5P29400 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.2□□□□□ -1.1
COL4A5P29400 AC090826.1-203ENST00000569235 490 ntBASIC8.2□□□□□ -1.1
COL4A5P29400 AL365223.1-201ENST00000574864 1297 ntBASIC8.2□□□□□ -1.1
COL4A5P29400 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.2□□□□□ -1.1
COL4A5P29400 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
COL4A5P29400 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL4A5P29400 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.2□□□□□ -1.1
COL4A5P29400 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
COL4A5P29400 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
COL4A5P29400 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 AOX2P-204ENST00000487742 3284 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
COL4A5P29400 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.19□□□□□ -1.1
COL4A5P29400 AC083862.1-201ENST00000427378 1242 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 RPL5P7-201ENST00000444235 813 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.19□□□□□ -1.1
COL4A5P29400 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.19□□□□□ -1.1
COL4A5P29400 AL390198.2-201ENST00000510553 222 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.19□□□□□ -1.1
COL4A5P29400 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.19□□□□□ -1.1
COL4A5P29400 AL357140.4-201ENST00000636827 412 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 ANKRD20A5P-201ENST00000431648 3556 ntBASIC8.19□□□□□ -1.1
COL4A5P29400 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.19□□□□□ -1.1
COL4A5P29400 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.19□□□□□ -1.1
COL4A5P29400 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.19□□□□□ -1.1
COL4A5P29400 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL4A5P29400 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AC018992.1-201ENST00000523778 2149 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 RPL24P7-201ENST00000399435 453 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AC092865.3-201ENST00000425390 1026 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AL391987.1-201ENST00000441025 200 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 RN7SL101P-201ENST00000496350 279 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AC011411.1-201ENST00000509592 876 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.18□□□□□ -1.1
COL4A5P29400 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.18□□□□□ -1.1
COL4A5P29400 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.18□□□□□ -1.1
COL4A5P29400 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.18□□□□□ -1.1
COL4A5P29400 AL451064.2-201ENST00000623514 1654 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
COL4A5P29400 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AC104966.1-201ENST00000467010 1464 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC022296.2-201ENST00000512424 202 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 IGKV3D-25-201ENST00000519599 235 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 IGHV3-75-201ENST00000523951 358 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.18□□□□□ -1.1
COL4A5P29400 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms