Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC087499.1-201ENST00000418141 1075 ntBASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC133561.5-201ENST00000635547 218 ntBASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC097493.4-201ENST00000641197 219 ntBASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 KRT18P21-201ENST00000515767 1272 ntBASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA9Q9Y5G4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA9Q9Y5G4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 AC012306.2-201ENST00000609350 630 ntBASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA9Q9Y5G4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 AL355075.4-201ENST00000554988 638 ntBASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms