Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 AC091305.1-201ENST00000479476 895 ntBASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB1Q9Y5G3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 AC079598.2-202ENST00000546624 1451 ntBASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB1Q9Y5G3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB1Q9Y5G3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 MIR2861-201ENST00000636310 90 ntBASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 AL049812.1-201ENST00000432563 2267 ntBASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms