Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 AC060766.5-201ENST00000590539 871 ntBASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 AL589743.5-201ENST00000616611 1050 ntBASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB1Q9Y5F3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 SMG8-203ENST00000578922 2178 ntBASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHB1Q9Y5F3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 FAM197Y4-202ENST00000622692 608 ntBASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 HLA-B-256ENST00000639848 1089 ntBASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB1Q9Y5F3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 RPPH1-201ENST00000516869 333 ntBASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 C1QBPP2-201ENST00000528754 825 ntBASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB1Q9Y5F3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms