Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 AC009237.14-201ENST00000609975 1594 ntBASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 AC120498.9-201ENST00000339021 3867 ntBASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.86■□□□□ 0.45
EXOSC1Q9Y3B2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 AL354811.1-201ENST00000610286 706 ntBASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 AL355001.2-201ENST00000620617 1191 ntBASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EXOSC1Q9Y3B2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.84■□□□□ 0.45
EXOSC1Q9Y3B2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 RASA4CP-201ENST00000424092 1398 ntBASIC17.83■□□□□ 0.45
EXOSC1Q9Y3B2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EXOSC1Q9Y3B2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 AC091799.1-201ENST00000422823 811 ntBASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 AP001330.3-201ENST00000520123 633 ntBASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms